Difference between revisions of "SEROTONIN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7737 RXN-7737] == * direction: ** REVERSIBLE * common name: ** ll-diaminopimelate_chloroplastic...")
(Created page with "Category:Gene == Gene Tiso_gene_18337 == * left end position: ** 918 * transcription direction: ** NEGATIVE * right end position: ** 2858 * centisome position: ** 29.80519...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7737 RXN-7737] ==
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== Gene Tiso_gene_18337 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 918
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* common name:
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* transcription direction:
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** ll-diaminopimelate_chloroplastic
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.6.1.83 EC-2.6.1.83]
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** 2858
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* centisome position:
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** 29.805195   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PYRROLINECARBDEHYDROG-RXN]]
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** 1 [[LL-DIAMINOPIMELATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 L,L-diaminopimelate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 (S)-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 L-glutamate[c] '''+''' 1 H2O[c] '''+''' 1 H+[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-14116]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_18833]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***ec-number
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** EXPERIMENTAL_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[PROUT-PWY]]
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** [[pantograph]]-[[athaliana]]
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* [[ARGASEDEG-PWY]]
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** [[pantograph]]-[[synechocystis]]
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* [[PWY-6853]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=918}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23988 23988]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2858}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07613 R07613]
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{{#set: centisome position=29.805195    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=PYRROLINECARBDEHYDROG-RXN|RXN-14116}}
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{{#set: common name=ll-diaminopimelate_chloroplastic}}
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{{#set: pathway associated=PROUT-PWY|ARGASEDEG-PWY|PWY-6853}}
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{{#set: ec number=EC-2.6.1.83}}
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{{#set: gene associated=Tiso_gene_18833}}
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{{#set: in pathway=PWY-5097}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:38, 18 March 2018

Gene Tiso_gene_18337

  • left end position:
    • 918
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2858
  • centisome position:
    • 29.805195
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SEROTONIN&oldid=25865"