Difference between revisions of "Tiso gene 14257"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_250 == * left end position: ** 608 * transcription direction: ** NEGATIVE * right end position: ** 14032 * centisome position: ** 1.6500665...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.2.1...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_250 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] ==
−
* left end position:
+
* direction:
−
** 608
+
** REVERSIBLE
−
* transcription direction:
+
* ec number:
−
** NEGATIVE
+
** [http://enzyme.expasy.org/EC/4.2.1.116 EC-4.2.1.116]
−
* right end position:
+
−
** 14032
+
−
* centisome position:
+
−
** 1.6500665   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ADENOSINETRIPHOSPHATASE-RXN]]
+
* With identifiers:
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 [[3-HYDROXY-PROPIONYL-COA]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[ACRYLYL-COA]][c]
−
* [[ATPASE-RXN]]
+
* With common name(s):
−
** in-silico_annotation
+
** 1 3-hydroxypropanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 acryloyl-CoA[c]
−
***ec-number
+
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
== Genes associated with this reaction  ==
−
** [[pantograph]]-[[esiliculosus]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[RXN-12195]]
+
* [[Tiso_gene_5857]]
−
** [[pantograph]]-[[esiliculosus]]
+
** [[pantograph]]-[[athaliana]]
−
* [[RXN-12196]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[RXN0-5462]]
+
** [[pantograph]]-[[creinhardtii]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_16703]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_14257]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
== Pathways associated ==
+
** [[pantograph]]-[[creinhardtii]]
−
* [[PWY-7184]]
+
== Pathways ==
−
* [[PWY-7198]]
+
* [[PWY-7574]], propanoyl-CoA degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574]
−
* [[PWY-6545]]
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY-3941]], &beta;-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3941 PWY-3941]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
 +
** '''4''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
 +
** '''8''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=608}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26518 26518]
−
{{#set: right end position=14032}}
+
* LIGAND-RXN:
−
{{#set: centisome position=1.6500665    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03045 R03045]
−
{{#set: reaction associated=ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
+
{{#set: ec number=EC-4.2.1.116}}
 +
{{#set: gene associated=Tiso_gene_5857|Tiso_gene_16703|Tiso_gene_14257}}
 +
{{#set: in pathway=PWY-7574|PWY-3941|PWY-5743|PWY-5789|PWY-5744}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:40, 18 March 2018

Reaction RXN-6383

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7574, propanoyl-CoA degradation II: PWY-7574
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-3941, β-alanine biosynthesis II: PWY-3941
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
    • 8 reactions found over 16 reactions in the full pathway
  • PWY-5744, glyoxylate assimilation: PWY-5744
    • 2 reactions found over 11 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14257&oldid=26033"