Difference between revisions of "ATDAM"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15131 RXN-15131] == * direction: ** LEFT-TO-RIGHT * common name: ** cystathionine beta-lyase *...")
(Created page with "Category:Gene == Gene Tiso_gene_16523 == * left end position: ** 196 * transcription direction: ** POSITIVE * right end position: ** 2224 * centisome position: ** 4.556020...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15131 RXN-15131] ==
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== Gene Tiso_gene_16523 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 196
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* common name:
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* transcription direction:
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** cystathionine beta-lyase
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** POSITIVE
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* right end position:
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** 2224
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* centisome position:
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** 4.5560203   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-13185]]
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** 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[HOMO-CYS]][c] '''+''' 1 [[2-AMINOACRYLATE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 L-cystathionine[c] '''=>''' 1 H+[c] '''+''' 1 L-homocysteine[c] '''+''' 1 2-aminoprop-2-enoate[c]
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* [[RXN-7984]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-7985]]
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* [[Tiso_gene_3732]]
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** in-silico_annotation
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** EXPERIMENTAL_ANNOTATION
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***ec-number
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***AUTOMATED-NAME-MATCH
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-5945]]
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* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=196}}
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{{#set: common name=cystathionine beta-lyase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Tiso_gene_3732}}
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{{#set: right end position=2224}}
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{{#set: in pathway=PWY-702|PWY-801|HOMOSER-METSYN-PWY}}
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{{#set: centisome position=4.5560203    }}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=RXN-13185|RXN-7984|RXN-7985}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: pathway associated=PWY-5945}}
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{{#set: reconstruction source=experimental_annotation}}
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Revision as of 18:41, 18 March 2018

Gene Tiso_gene_16523

  • left end position:
    • 196
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2224
  • centisome position:
    • 4.5560203
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ATDAM&oldid=26099"