Difference between revisions of "NITRIC-OXIDE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroli...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.55-RXN 3.2.1.55-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** acetyl-_carbox...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.55-RXN 3.2.1.55-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** dihydrolipoyllysine-residue_succinyltransferase_component_of_2-oxoglutarate_dehydrogenase_mitochondrial
+
** ORF
 +
** acetyl-_carboxylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.4.2 EC-1.2.4.2]
+
** [http://enzyme.expasy.org/EC/3.2.1.55 EC-3.2.1.55]
 
* Synonym(s):
 
* Synonym(s):
−
** Oxoglutarate decarboxylase
 
−
** 2-oxoglutarate decarboxylation
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[Oxo-glutarate-dehydro-suc-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** n [[WATER]][c] '''+''' 1 [[1-5-L-Arabinooligosaccharides]][c] '''=>''' n [[CPD-12045]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
+
** n H2O[c] '''+''' 1 a (1->5)-α-L-arabinan oligosaccharide[c] '''=>''' n α-L-arabinofuranose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10209]]
+
* [[Tiso_gene_10897]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_6300]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
* [[Tiso_gene_14849]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6299]]
 +
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[annotation]]
−
** [[primary_network]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[annotation]]:
+
*** Tool: [[pathwaytools]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pathwaytools]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P23129 P23129]
+
** [http://www.uniprot.org/uniprot/P82594 P82594]
−
** [http://www.uniprot.org/uniprot/Q02218 Q02218]
+
** [http://www.uniprot.org/uniprot/Q9KBQ8 Q9KBQ8]
−
** [http://www.uniprot.org/uniprot/Q60597 Q60597]
+
** [http://www.uniprot.org/uniprot/P42255 P42255]
−
** [http://www.uniprot.org/uniprot/Q9JRJ8 Q9JRJ8]
+
** [http://www.uniprot.org/uniprot/P53627 P53627]
−
** [http://www.uniprot.org/uniprot/P20967 P20967]
+
** [http://www.uniprot.org/uniprot/P49943 P49943]
−
** [http://www.uniprot.org/uniprot/P0AFG3 P0AFG3]
+
−
** [http://www.uniprot.org/uniprot/P20707 P20707]
+
−
** [http://www.uniprot.org/uniprot/P51056 P51056]
+
−
** [http://www.uniprot.org/uniprot/Q56600 Q56600]
+
−
** [http://www.uniprot.org/uniprot/O49541 O49541]
+
−
** [http://www.uniprot.org/uniprot/Q59106 Q59106]
+
−
** [http://www.uniprot.org/uniprot/Q9M2T8 Q9M2T8]
+
−
** [http://www.uniprot.org/uniprot/Q9ZRQ2 Q9ZRQ2]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=dihydrolipoyllysine-residue_succinyltransferase_component_of_2-oxoglutarate_dehydrogenase_mitochondrial}}
+
{{#set: common name=ORF}}
−
{{#set: ec number=EC-1.2.4.2}}
+
{{#set: common name=acetyl-_carboxylase}}
−
{{#set: common name=Oxoglutarate decarboxylase|2-oxoglutarate decarboxylation}}
+
{{#set: ec number=EC-3.2.1.55}}
−
{{#set: gene associated=Tiso_gene_10209}}
+
{{#set: gene associated=Tiso_gene_10897|Tiso_gene_6300|Tiso_gene_14849|Tiso_gene_6299}}
−
{{#set: in pathway=PWY-5084|PWY66-398}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 18:41, 18 March 2018

Reaction 3.2.1.55-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • acetyl-_carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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