Difference between revisions of "RXN-5821"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16629 RXN-16629] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...")
(Created page with "Category:Gene == Gene Tiso_gene_6069 == * left end position: ** 148 * transcription direction: ** NEGATIVE * right end position: ** 2554 * centisome position: ** 1.1740441...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16629 RXN-16629] ==
+
== Gene Tiso_gene_6069 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 148
−
* common name:
+
* transcription direction:
−
** 3-oxoacyl-synthase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
** 2554
 +
* centisome position:
 +
** 1.1740441   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[1.1.1.8-RXN]]
−
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[Oleoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[11Z-3-oxo-icos-11-enoyl-ACPs]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 an oleoyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 an (11Z)-3-oxo-icos-11-enoyl-[acp][c]
+
** experimental_annotation
−
 
+
***ec-number
−
== Genes associated with this reaction  ==
+
** [[pantograph]]-[[esiliculosus]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** [[pantograph]]-[[creinhardtii]]
−
* [[Tiso_gene_5939]]
+
* [[GLYC3PDEHYDROGBIOSYN-RXN]]
−
** IN-SILICO_ANNOTATION
+
** [[pantograph]]-[[esiliculosus]]
−
***EC-NUMBER
+
== Pathways associated ==
−
** EXPERIMENTAL_ANNOTATION
+
* [[PWY-6118]]
−
***EC-NUMBER
+
* [[PWY-7385]]
−
== Pathways ==
+
* [[PWY-5981]]
−
* [[PWY-7663]], gondoate biosynthesis (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7663 PWY-7663]
+
* [[PWY-5667]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY0-1319]]
−
== Reconstruction information  ==
+
* [[PWY-7411]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=148}}
−
{{#set: common name=3-oxoacyl-synthase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: right end position=2554}}
−
{{#set: gene associated=Tiso_gene_5939}}
+
{{#set: centisome position=1.1740441    }}
−
{{#set: in pathway=PWY-7663}}
+
{{#set: reaction associated=1.1.1.8-RXN|GLYC3PDEHYDROGBIOSYN-RXN}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: pathway associated=PWY-6118|PWY-7385|PWY-5981|PWY-5667|PWY0-1319|PWY-7411}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:42, 18 March 2018

Gene Tiso_gene_6069

  • left end position:
    • 148
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2554
  • centisome position:
    • 1.1740441
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-5821&oldid=26245"