Difference between revisions of "RXN-5821"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16629 RXN-16629] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...")
(Created page with "Category:Gene == Gene Tiso_gene_6069 == * left end position: ** 148 * transcription direction: ** NEGATIVE * right end position: ** 2554 * centisome position: ** 1.1740441...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16629 RXN-16629] ==
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== Gene Tiso_gene_6069 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 148
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* common name:
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* transcription direction:
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** 3-oxoacyl-synthase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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** 2554
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* centisome position:
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** 1.1740441   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[1.1.1.8-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[Oleoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[11Z-3-oxo-icos-11-enoyl-ACPs]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 an oleoyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 an (11Z)-3-oxo-icos-11-enoyl-[acp][c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_5939]]
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* [[GLYC3PDEHYDROGBIOSYN-RXN]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[esiliculosus]]
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***EC-NUMBER
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== Pathways associated ==
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-6118]]
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***EC-NUMBER
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* [[PWY-7385]]
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== Pathways ==
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* [[PWY-5981]]
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* [[PWY-7663]], gondoate biosynthesis (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7663 PWY-7663]
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* [[PWY-5667]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-1319]]
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== Reconstruction information  ==
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* [[PWY-7411]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=148}}
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{{#set: common name=3-oxoacyl-synthase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: right end position=2554}}
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{{#set: gene associated=Tiso_gene_5939}}
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{{#set: centisome position=1.1740441    }}
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{{#set: in pathway=PWY-7663}}
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{{#set: reaction associated=1.1.1.8-RXN|GLYC3PDEHYDROGBIOSYN-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-6118|PWY-7385|PWY-5981|PWY-5667|PWY0-1319|PWY-7411}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:42, 18 March 2018

Gene Tiso_gene_6069

  • left end position:
    • 148
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2554
  • centisome position:
    • 1.1740441
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-5821&oldid=26245"