Difference between revisions of "Tiso gene 15144"

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(Created page with "Category:Gene == Gene Tiso_gene_13846 == * left end position: ** 10575 * transcription direction: ** POSITIVE * right end position: ** 13053 * centisome position: ** 78.85...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13697 RXN-13697] == * direction: ** REVERSIBLE * common name: ** aspartate_aminotransferase **...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_13846 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13697 RXN-13697] ==
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* left end position:
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* direction:
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** 10575
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** aspartate_aminotransferase
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* right end position:
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** aminotransferase
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** 13053
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
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** 78.85906   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-15684]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[L-ASPARTATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[OXALACETIC_ACID]][c]
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***ec-number
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* With common name(s):
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* [[THIOL-OXIDASE-RXN]]
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** 1 L-aspartate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 oxaloacetate[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7533]]
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* [[Tiso_gene_13538]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17809]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12889]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6815]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15680]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17718]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''7''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=10575}}
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{{#set: direction=REVERSIBLE}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=aspartate_aminotransferase}}
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{{#set: right end position=13053}}
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{{#set: common name=aminotransferase}}
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{{#set: centisome position=78.85906    }}
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{{#set: ec number=EC-2.6.1.1}}
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{{#set: reaction associated=RXN-15684|THIOL-OXIDASE-RXN}}
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{{#set: gene associated=Tiso_gene_13538|Tiso_gene_17809|Tiso_gene_12889|Tiso_gene_6815|Tiso_gene_15680|Tiso_gene_17718}}
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{{#set: pathway associated=PWY-7533}}
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{{#set: in pathway=PWY-7117|PWY-7115}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:43, 18 March 2018

Reaction RXN-13697

  • direction:
    • REVERSIBLE
  • common name:
    • aspartate_aminotransferase
    • aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 7 reactions found over 10 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15144&oldid=26378"