Difference between revisions of "RXN1G-1436"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDLIPACETRANS-RXN DIHYDLIPACETRANS-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http:/...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridinesynthase...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** trna_pseudouridinesynthase | ||
| + | ** trna_pseudouridine_synthase | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/5.4.99.26 EC-5.4.99.26] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[tRNA-uridine65]][c] '''=>''' 1 [[tRNA-pseudouridine65]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a uridine65 in tRNA[c] '''=>''' 1 a pseudouridine65 in tRNA[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[Tiso_gene_2988]] |
| − | ** [[ | + | ** IN-SILICO_ANNOTATION |
| − | * [[ | + | ***AUTOMATED-NAME-MATCH |
| − | ** [[ | + | * [[Tiso_gene_4021]] |
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
| + | * [[Tiso_gene_11913]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
| + | * [[Tiso_gene_19622]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
| + | * [[Tiso_gene_9833]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
| + | * [[Tiso_gene_4020]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
| + | * [[Tiso_gene_18959]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[annotation]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
| − | |||
| − | |||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: ec number=EC- | + | {{#set: common name=trna_pseudouridinesynthase}} |
| − | {{#set: gene associated= | + | {{#set: common name=trna_pseudouridine_synthase}} |
| + | {{#set: ec number=EC-5.4.99.26}} | ||
| + | {{#set: gene associated=Tiso_gene_2988|Tiso_gene_4021|Tiso_gene_11913|Tiso_gene_19622|Tiso_gene_9833|Tiso_gene_4020|Tiso_gene_18959}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction source=annotation-in-silico_annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction tool=pathwaytools}} |
Revision as of 18:43, 18 March 2018
Contents
Reaction RXN-11840
- direction:
- LEFT-TO-RIGHT
- common name:
- trna_pseudouridinesynthase
- trna_pseudouridine_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 tRNA-uridine65[c] => 1 tRNA-pseudouridine65[c]
- With common name(s):
- 1 a uridine65 in tRNA[c] => 1 a pseudouridine65 in tRNA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_2988
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- IN-SILICO_ANNOTATION
- Tiso_gene_4021
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- IN-SILICO_ANNOTATION
- Tiso_gene_11913
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- IN-SILICO_ANNOTATION
- Tiso_gene_19622
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- IN-SILICO_ANNOTATION
- Tiso_gene_9833
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- IN-SILICO_ANNOTATION
- Tiso_gene_4020
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- IN-SILICO_ANNOTATION
- Tiso_gene_18959
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- IN-SILICO_ANNOTATION
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
