Difference between revisions of "Tiso gene 20270"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14276 RXN-14276] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COB-I-ALAMIN COB-I-ALAMIN] == * smiles: ** CC%10(=C(C)C=C9(N8(C%12(OC(CO)C(OP([O-])(=O)OC(C)CNC...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14276 RXN-14276] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COB-I-ALAMIN COB-I-ALAMIN] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC%10(=C(C)C=C9(N8(C%12(OC(CO)C(OP([O-])(=O)OC(C)CNC(=O)CCC1(C)(C(CC(N)=O)[CH]%11(C7(C)(C(C)(CC(N)=O)C(CCC(=O)N)C6(C(C)=C5(C(CC(=O)N)(C)C(CCC(N)=O)C4(C=C3(C(C)(C)C(CCC(N)=O)C2(C(C)=C1N([Co----]([N+]=23)([N+]=45)([N+]=67)[N+](=C8)C9=C%10)%11)))))))))C(O)%12))))
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/4.2.1.119 EC-4.2.1.119]
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** InChIKey=OMAOKVYASDIYQG-DSRCUDDDSA-L
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* common name:
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** cob(I)alamin
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* molecular weight:
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** 1329.36   
 
* Synonym(s):
 
* Synonym(s):
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** cobalamin
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** B12s
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[COBALADENOSYLTRANS-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD0-2108]][c] '''=>''' 1 [[CPD-14916]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 trans-oct-2-enoyl-CoA[c] '''=>''' 1 (R)-3-hydroxyoctanoyl-CoA[c]
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−
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6885]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14262]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16145]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 18534-66-2
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{{#set: ec number=EC-4.2.1.119}}
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* METABOLIGHTS : MTBLC15982
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{{#set: gene associated=Tiso_gene_6885|Tiso_gene_14262|Tiso_gene_16145}}
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* PUBCHEM:
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{{#set: in pathway=PWY-6920}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460183 5460183]
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{{#set: reconstruction category=orthology}}
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* HMDB : HMDB03429
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{{#set: reconstruction tool=pantograph}}
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* LIGAND-CPD:
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{{#set: reconstruction source=esiliculosus}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00853 C00853]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.4573816.html 4573816]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15982 15982]
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* BIGG : cbl1
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{{#set: smiles=CC%10(=C(C)C=C9(N8(C%12(OC(CO)C(OP([O-])(=O)OC(C)CNC(=O)CCC1(C)(C(CC(N)=O)[CH]%11(C7(C)(C(C)(CC(N)=O)C(CCC(=O)N)C6(C(C)=C5(C(CC(=O)N)(C)C(CCC(N)=O)C4(C=C3(C(C)(C)C(CCC(N)=O)C2(C(C)=C1N([Co----]([N+]=23)([N+]=45)([N+]=67)[N+](=C8)C9=C%10)%11)))))))))C(O)%12))))}}
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{{#set: inchi key=InChIKey=OMAOKVYASDIYQG-DSRCUDDDSA-L}}
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{{#set: common name=cob(I)alamin}}
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{{#set: molecular weight=1329.36    }}
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{{#set: common name=cobalamin|B12s}}
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{{#set: consumed by=COBALADENOSYLTRANS-RXN}}

Revision as of 18:44, 18 March 2018

Metabolite COB-I-ALAMIN

  • smiles:
    • CC%10(=C(C)C=C9(N8(C%12(OC(CO)C(OP([O-])(=O)OC(C)CNC(=O)CCC1(C)(C(CC(N)=O)[CH]%11(C7(C)(C(C)(CC(N)=O)C(CCC(=O)N)C6(C(C)=C5(C(CC(=O)N)(C)C(CCC(N)=O)C4(C=C3(C(C)(C)C(CCC(N)=O)C2(C(C)=C1N([Co----]([N+]=23)([N+]=45)([N+]=67)[N+](=C8)C9=C%10)%11)))))))))C(O)%12))))
  • inchi key:
    • InChIKey=OMAOKVYASDIYQG-DSRCUDDDSA-L
  • common name:
    • cob(I)alamin
  • molecular weight:
    • 1329.36
  • Synonym(s):
    • cobalamin
    • B12s

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 18534-66-2
  • METABOLIGHTS : MTBLC15982
  • PUBCHEM:
  • HMDB : HMDB03429
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : cbl1
"CC%10(=C(C)C=C9(N8(C%12(OC(CO)C(OP([O-])(=O)OC(C)CNC(=O)CCC1(C)(C(CC(N)=O)[CH]%11(C7(C)(C(C)(CC(N)=O)C(CCC(=O)N)C6(C(C)=C5(C(CC(=O)N)(C)C(CCC(N)=O)C4(C=C3(C(C)(C)C(CCC(N)=O)C2(C(C)=C1N([Co----]([N+]=23)([N+]=45)([N+]=67)[N+](=C8)C9=C%10)%11)))))))))C(O)%12))))" cannot be used as a page name in this wiki.



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