Difference between revisions of "CPD0-1905"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUTP-PYROP-RXN DUTP-PYROP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** inosine_triphosph...")
(Created page with "Category:Gene == Gene Tiso_gene_152 == * left end position: ** 28220 * transcription direction: ** POSITIVE * right end position: ** 30377 * centisome position: ** 69.5553...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUTP-PYROP-RXN DUTP-PYROP-RXN] ==
+
== Gene Tiso_gene_152 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 28220
−
* common name:
+
* transcription direction:
−
** inosine_triphosphate
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/3.6.1.23 EC-3.6.1.23]
+
** 30377
−
** [http://enzyme.expasy.org/EC/3.6.1.9 EC-3.6.1.9]
+
* centisome position:
 +
** 69.55536   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[RXN-13398]]
−
** 1 [[DUTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DUMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 dUTP[c] '''+''' 1 H2O[c] '''=>''' 1 dUMP[c] '''+''' 1 H+[c] '''+''' 1 diphosphate[c]
+
* [[RXN-7676]]
−
 
+
** in-silico_annotation
−
== Genes associated with this reaction  ==
+
***ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-7677]]
−
* [[Tiso_gene_18793]]
+
** in-silico_annotation
−
** IN-SILICO_ANNOTATION
+
***ec-number
−
***EC-NUMBER
+
== Pathways associated ==
−
** [[pantograph]]-[[athaliana]]
+
* [[PWY-5068]]
−
* [[Tiso_gene_18792]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-7206]], pyrimidine deoxyribonucleotides dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7206 PWY-7206]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187]
+
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
+
−
** '''12''' reactions found over '''17''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=28220}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10248 10248]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=30377}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02100 R02100]
+
{{#set: centisome position=69.55536    }}
−
* UNIPROT:
+
{{#set: reaction associated=RXN-13398|RXN-7676|RXN-7677}}
−
** [http://www.uniprot.org/uniprot/Q89932 Q89932]
+
{{#set: pathway associated=PWY-5068}}
−
** [http://www.uniprot.org/uniprot/P33316 P33316]
+
−
** [http://www.uniprot.org/uniprot/O15923 O15923]
+
−
** [http://www.uniprot.org/uniprot/Q9PMK9 Q9PMK9]
+
−
** [http://www.uniprot.org/uniprot/Q9Z9C2 Q9Z9C2]
+
−
** [http://www.uniprot.org/uniprot/Q9JUW1 Q9JUW1]
+
−
** [http://www.uniprot.org/uniprot/P43792 P43792]
+
−
** [http://www.uniprot.org/uniprot/P32518 P32518]
+
−
** [http://www.uniprot.org/uniprot/P68635 P68635]
+
−
** [http://www.uniprot.org/uniprot/P68634 P68634]
+
−
** [http://www.uniprot.org/uniprot/Q76RE7 Q76RE7]
+
−
** [http://www.uniprot.org/uniprot/P03195 P03195]
+
−
** [http://www.uniprot.org/uniprot/Q89662 Q89662]
+
−
** [http://www.uniprot.org/uniprot/Q00030 Q00030]
+
−
** [http://www.uniprot.org/uniprot/P33317 P33317]
+
−
** [http://www.uniprot.org/uniprot/Q45920 Q45920]
+
−
** [http://www.uniprot.org/uniprot/P43058 P43058]
+
−
** [http://www.uniprot.org/uniprot/O80091 O80091]
+
−
** [http://www.uniprot.org/uniprot/O36404 O36404]
+
−
** [http://www.uniprot.org/uniprot/O41033 O41033]
+
−
** [http://www.uniprot.org/uniprot/Q9YML1 Q9YML1]
+
−
** [http://www.uniprot.org/uniprot/O39251 O39251]
+
−
** [http://www.uniprot.org/uniprot/O01934 O01934]
+
−
** [http://www.uniprot.org/uniprot/P10234 P10234]
+
−
** [http://www.uniprot.org/uniprot/P06968 P06968]
+
−
** [http://www.uniprot.org/uniprot/P09254 P09254]
+
−
** [http://www.uniprot.org/uniprot/P28892 P28892]
+
−
** [http://www.uniprot.org/uniprot/P28893 P28893]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=inosine_triphosphate}}
+
−
{{#set: ec number=EC-3.6.1.23}}
+
−
{{#set: ec number=EC-3.6.1.9}}
+
−
{{#set: gene associated=Tiso_gene_18793|Tiso_gene_18792}}
+
−
{{#set: in pathway=PWY-7206|PWY-7184|PWY-7187|PWY-6545|PWY0-166}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:44, 18 March 2018

Gene Tiso_gene_152

  • left end position:
    • 28220
  • transcription direction:
    • POSITIVE
  • right end position:
    • 30377
  • centisome position:
    • 69.55536
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD0-1905&oldid=26464"