Difference between revisions of "CPD0-181"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMO-CIT HOMO-CIT] == * smiles: ** C(C([O-])=O)CC(O)(C([O-])=O)CC([O-])=O * inchi key: ** InChI...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=APYRASE-RXN APYRASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [ht...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMO-CIT HOMO-CIT] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=APYRASE-RXN APYRASE-RXN] ==
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* smiles:
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* direction:
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** C(C([O-])=O)CC(O)(C([O-])=O)CC([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=XKJVEVRQMLKSMO-SSDOTTSWSA-K
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* common name:
 
* common name:
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** (2R)-homocitrate
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** ORF
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* molecular weight:
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* ec number:
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** 203.128   
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** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
 
* Synonym(s):
 
* Synonym(s):
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** 2-hydroxybutane-1,2,4-tricarboxylate
 
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** homocitric acid
 
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** 3-hydroxy-3-carboxyadipic acid
 
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** (2R)-2-hydroxybutane-1,2,4-tricarboxylate
 
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** (R)-2-hydroxybutane-1,2,4-tricarboxylate
 
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** homocitrate
 
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** (R)-homocitrate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 2 [[WATER]][c] '''+''' 1 [[ATP]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 2 [[Pi]][c]
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* [[RXN-13722]]
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* With common name(s):
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** 2 H2O[c] '''+''' 1 ATP[c] '''=>''' 2 H+[c] '''+''' 1 AMP[c] '''+''' 2 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_20236]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12899]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 3562-74-1
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20988 20988]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20849228 20849228]
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* LIGAND-RXN:
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* HMDB : HMDB03518
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** [http://www.genome.jp/dbget-bin/www_bget?R00085 R00085]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C01251 C01251]
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** [http://www.uniprot.org/uniprot/P80595 P80595]
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* CHEMSPIDER:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.chemspider.com/Chemical-Structure.20171681.html 20171681]
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{{#set: common name=ORF}}
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* CHEBI:
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{{#set: ec number=EC-3.6.1.5}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58884 58884]
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{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
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{{#set: smiles=C(C([O-])=O)CC(O)(C([O-])=O)CC([O-])=O}}
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{{#set: in pathway=}}
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{{#set: inchi key=InChIKey=XKJVEVRQMLKSMO-SSDOTTSWSA-K}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: common name=(2R)-homocitrate}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: molecular weight=203.128    }}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: common name=2-hydroxybutane-1,2,4-tricarboxylate|homocitric acid|3-hydroxy-3-carboxyadipic acid|(2R)-2-hydroxybutane-1,2,4-tricarboxylate|(R)-2-hydroxybutane-1,2,4-tricarboxylate|homocitrate|(R)-homocitrate}}
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{{#set: consumed or produced by=RXN-13722}}
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Revision as of 18:44, 18 March 2018

Reaction APYRASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H2O[c] + 1 ATP[c] => 2 H+[c] + 1 AMP[c] + 2 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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