Difference between revisions of "Tiso gene 8389"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFGLUSYNTH-RXN FORMYLTHFGLUSYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** bif...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] == * direction: ** REVERSIBLE * common name: ** carbonic_anhyd...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFGLUSYNTH-RXN FORMYLTHFGLUSYNTH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** bifunctional_protein
+
** carbonic_anhydrase
−
** folylpolyglutamate_synthase
+
** ORF
 +
** beta-type_carbonic_anhydrase
 +
** gamma_carbonic_anhydrase
 +
** alpha_ca
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.2.17 EC-6.3.2.17]
+
** [http://enzyme.expasy.org/EC/4.2.1.1 EC-4.2.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c]
+
** 1 [[H2CO3]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 L-glutamate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c]
+
** 1 carbonic acid[c] '''<=>''' 1 CO2[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_92]]
+
* [[Tiso_gene_19413]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_1600]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_15942]]
+
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_19414]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 +
** [[pantograph]]-[[creinhardtii]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_7660]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_18927]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_17511]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_9852]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3056]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_20230]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_6150]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-esiliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=bifunctional_protein}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10748 10748]
−
{{#set: common name=folylpolyglutamate_synthase}}
+
* LIGAND-RXN:
−
{{#set: ec number=EC-6.3.2.17}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00132 R00132]
−
{{#set: gene associated=Tiso_gene_92|Tiso_gene_15942}}
+
* UNIPROT:
−
{{#set: in pathway=PWY-2161}}
+
** [http://www.uniprot.org/uniprot/P07450 P07450]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/P07452 P07452]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P13634 P13634]
−
{{#set: reconstruction source=esiliculosus}}
+
** [http://www.uniprot.org/uniprot/P08060 P08060]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P16016 P16016]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P20507 P20507]
−
{{#set: reconstruction source=in-silico_annotation}}
+
** [http://www.uniprot.org/uniprot/P16015 P16015]
 +
** [http://www.uniprot.org/uniprot/P40881 P40881]
 +
** [http://www.uniprot.org/uniprot/Q7LZP1 Q7LZP1]
 +
** [http://www.uniprot.org/uniprot/Q8X938 Q8X938]
 +
** [http://www.uniprot.org/uniprot/P00921 P00921]
 +
** [http://www.uniprot.org/uniprot/P00917 P00917]
 +
** [http://www.uniprot.org/uniprot/P00915 P00915]
 +
** [http://www.uniprot.org/uniprot/P00918 P00918]
 +
** [http://www.uniprot.org/uniprot/P07451 P07451]
 +
** [http://www.uniprot.org/uniprot/P22748 P22748]
 +
** [http://www.uniprot.org/uniprot/P35218 P35218]
 +
** [http://www.uniprot.org/uniprot/P43166 P43166]
 +
** [http://www.uniprot.org/uniprot/P00916 P00916]
 +
** [http://www.uniprot.org/uniprot/P00920 P00920]
 +
** [http://www.uniprot.org/uniprot/P00922 P00922]
 +
** [http://www.uniprot.org/uniprot/O24855 O24855]
 +
** [http://www.uniprot.org/uniprot/Q9PIQ7 Q9PIQ7]
 +
** [http://www.uniprot.org/uniprot/P14141 P14141]
 +
** [http://www.uniprot.org/uniprot/P43165 P43165]
 +
** [http://www.uniprot.org/uniprot/P07630 P07630]
 +
** [http://www.uniprot.org/uniprot/P27139 P27139]
 +
** [http://www.uniprot.org/uniprot/P35219 P35219]
 +
** [http://www.uniprot.org/uniprot/Q7M317 Q7M317]
 +
** [http://www.uniprot.org/uniprot/Q7M316 Q7M316]
 +
** [http://www.uniprot.org/uniprot/P0ABE9 P0ABE9]
 +
** [http://www.uniprot.org/uniprot/P18761 P18761]
 +
** [http://www.uniprot.org/uniprot/P17067 P17067]
 +
** [http://www.uniprot.org/uniprot/P23589 P23589]
 +
** [http://www.uniprot.org/uniprot/P24258 P24258]
 +
** [http://www.uniprot.org/uniprot/P27140 P27140]
 +
** [http://www.uniprot.org/uniprot/P27134 P27134]
 +
** [http://www.uniprot.org/uniprot/P46510 P46510]
 +
** [http://www.uniprot.org/uniprot/P46511 P46511]
 +
** [http://www.uniprot.org/uniprot/P46512 P46512]
 +
** [http://www.uniprot.org/uniprot/P46281 P46281]
 +
** [http://www.uniprot.org/uniprot/P18915 P18915]
 +
** [http://www.uniprot.org/uniprot/Q41728 Q41728]
 +
** [http://www.uniprot.org/uniprot/Q41729 Q41729]
 +
** [http://www.uniprot.org/uniprot/P27141 P27141]
 +
** [http://www.uniprot.org/uniprot/Q40628 Q40628]
 +
** [http://www.uniprot.org/uniprot/Q08056 Q08056]
 +
** [http://www.uniprot.org/uniprot/P40880 P40880]
 +
** [http://www.uniprot.org/uniprot/Q39588 Q39588]
 +
** [http://www.uniprot.org/uniprot/P93108 P93108]
 +
** [http://www.uniprot.org/uniprot/Q92051 Q92051]
 +
** [http://www.uniprot.org/uniprot/O04855 O04855]
 +
** [http://www.uniprot.org/uniprot/Q41088 Q41088]
 +
** [http://www.uniprot.org/uniprot/Q41089 Q41089]
 +
** [http://www.uniprot.org/uniprot/P46513 P46513]
 +
** [http://www.uniprot.org/uniprot/O04846 O04846]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=carbonic_anhydrase}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=beta-type_carbonic_anhydrase}}
 +
{{#set: common name=gamma_carbonic_anhydrase}}
 +
{{#set: common name=alpha_ca}}
 +
{{#set: ec number=EC-4.2.1.1}}
 +
{{#set: gene associated=Tiso_gene_19413|Tiso_gene_1600|Tiso_gene_19414|Tiso_gene_7660|Tiso_gene_18927|Tiso_gene_17511|Tiso_gene_9852|Tiso_gene_3056|Tiso_gene_20230|Tiso_gene_6150}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:45, 18 March 2018

Reaction CARBODEHYDRAT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • carbonic_anhydrase
    • ORF
    • beta-type_carbonic_anhydrase
    • gamma_carbonic_anhydrase
    • alpha_ca
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 carbonic acid[c] <=> 1 CO2[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8389&oldid=26586"