Difference between revisions of "Tiso gene 19414"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** choline_e...")
(Created page with "Category:Gene == Gene Tiso_gene_12881 == * left end position: ** 2847 * transcription direction: ** POSITIVE * right end position: ** 6539 * centisome position: ** 42.7285...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] ==
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== Gene Tiso_gene_12881 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2847
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* common name:
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* transcription direction:
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** choline_ethanolamine_kinase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.1.32 EC-2.7.1.32]
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** 6539
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* centisome position:
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** 42.7285   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[3.6.4.4-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[CHOLINE]][c] '''=>''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 ATP[c] '''+''' 1 choline[c] '''=>''' 1 phosphocholine[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_16805]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7818]], type IV lipoteichoic acid biosynthesis (S. pneumoniae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7818 PWY-7818]
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** '''1''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2847}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12837 12837]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6539}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01021 R01021]
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{{#set: centisome position=42.7285    }}
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* UNIPROT:
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{{#set: reaction associated=3.6.4.4-RXN}}
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** [http://www.uniprot.org/uniprot/P20485 P20485]
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** [http://www.uniprot.org/uniprot/Q01134 Q01134]
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** [http://www.uniprot.org/uniprot/Q42809 Q42809]
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** [http://www.uniprot.org/uniprot/Q42810 Q42810]
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** [http://www.uniprot.org/uniprot/Q42811 Q42811]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=choline_ethanolamine_kinase}}
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{{#set: ec number=EC-2.7.1.32}}
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{{#set: gene associated=Tiso_gene_16805}}
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{{#set: in pathway=PWY-7782|PWY3O-450|PWY-7818}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:45, 18 March 2018

Gene Tiso_gene_12881

  • left end position:
    • 2847
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6539
  • centisome position:
    • 42.7285
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19414&oldid=26603"