Difference between revisions of "RXN-7605"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] == * direction: ** LEFT-TO-RIGHT * common name: ** gdp-man:man_c_-pp-dol_alpha-_...")
(Created page with "Category:Gene == Gene Tiso_gene_3065 == * left end position: ** 3122 * transcription direction: ** POSITIVE * right end position: ** 7036 * centisome position: ** 17.73561...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] ==
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== Gene Tiso_gene_3065 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3122
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* common name:
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* transcription direction:
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** gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.4.1.131 EC-2.4.1.131]
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** 7036
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* centisome position:
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** 17.735615   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-11856]]
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** 1 [[CPD-5162]][c] '''+''' 2 [[GDP-MANNOSE]][c] '''=>''' 2 [[GDP]][c] '''+''' 1 [[CPD-5164]][c] '''+''' 2 [[PROTON]][c]
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** experimental_annotation
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* With common name(s):
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***ec-number
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** 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 2 GDP-α-D-mannose[c] '''=>''' 2 GDP[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 2 H+[c]
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== Pathways associated ==
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* [[PWY-6829]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15372]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15849]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3122}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29523 29523]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=7036}}
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{{#set: common name=gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase}}
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{{#set: centisome position=17.735615    }}
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{{#set: ec number=EC-2.4.1.131}}
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{{#set: reaction associated=RXN-11856}}
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{{#set: gene associated=Tiso_gene_15372|Tiso_gene_15849}}
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{{#set: pathway associated=PWY-6829}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:45, 18 March 2018

Gene Tiso_gene_3065

  • left end position:
    • 3122
  • transcription direction:
    • POSITIVE
  • right end position:
    • 7036
  • centisome position:
    • 17.735615
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7605&oldid=26624"