Difference between revisions of "CH33ADO"

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(Created page with "Category:Gene == Gene Tiso_gene_5865 == * left end position: ** 7412 * transcription direction: ** NEGATIVE * right end position: ** 12818 * centisome position: ** 57.7078...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] == * direction: ** LEFT-TO-RIGHT * common name: ** gdp-man:man_c_-pp-dol_alpha-_...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_5865 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] ==
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* left end position:
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* direction:
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** 7412
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase
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* right end position:
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* ec number:
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** 12818
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** [http://enzyme.expasy.org/EC/2.4.1.131 EC-2.4.1.131]
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* centisome position:
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** 57.707882   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[FGAMSYN-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-5162]][c] '''+''' 2 [[GDP-MANNOSE]][c] '''=>''' 2 [[GDP]][c] '''+''' 1 [[CPD-5164]][c] '''+''' 2 [[PROTON]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 2 GDP-α-D-mannose[c] '''=>''' 2 GDP[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 2 H+[c]
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***ec-number
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6121]]
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* [[Tiso_gene_15849]]
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* [[PWY-6122]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-6277]]
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* [[Tiso_gene_15372]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=7412}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29523 29523]
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{{#set: right end position=12818}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=57.707882    }}
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{{#set: common name=gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase}}
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{{#set: reaction associated=FGAMSYN-RXN}}
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{{#set: ec number=EC-2.4.1.131}}
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{{#set: pathway associated=PWY-6121|PWY-6122|PWY-6277}}
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{{#set: gene associated=Tiso_gene_15849|Tiso_gene_15372}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 19:45, 18 March 2018

Reaction RXN-5464

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 2 GDP-α-D-mannose[c] => 2 GDP[c] + 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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