Difference between revisions of "ALARACECAT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13306 RXN-13306] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MEVALONATE-KINASE-RXN MEVALONATE-KINASE-RXN] == * direction: ** REVERSIBLE * common name: ** mevalo...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13306 RXN-13306] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MEVALONATE-KINASE-RXN MEVALONATE-KINASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** mevalonate_kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.93 EC-1.3.1.93]
+
** [http://enzyme.expasy.org/EC/2.7.1.36 EC-2.7.1.36]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[CPD-14280]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-9965]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[MEVALONATE]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-499]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 trans-arachido-2-enoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 icosanoyl-CoA[c] '''+''' 1 NADP+[c]
+
** 1 ATP[c] '''+''' 1 (R)-mevalonate[c] '''<=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 (R)-mevalonate 5-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_3811]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
+
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
−
** '''16''' reactions found over '''16''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: ec number=EC-1.3.1.93}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17065 17065]
−
{{#set: in pathway=PWY-7036}}
+
* LIGAND-RXN:
−
{{#set: reconstruction category=annotation}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02245 R02245]
−
{{#set: reconstruction tool=pathwaytools}}
+
* UNIPROT:
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
** [http://www.uniprot.org/uniprot/P17256 P17256]
 +
** [http://www.uniprot.org/uniprot/Q03426 Q03426]
 +
** [http://www.uniprot.org/uniprot/P07277 P07277]
 +
** [http://www.uniprot.org/uniprot/Q58487 Q58487]
 +
** [http://www.uniprot.org/uniprot/P46086 P46086]
 +
** [http://www.uniprot.org/uniprot/Q09780 Q09780]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=mevalonate_kinase}}
 +
{{#set: ec number=EC-2.7.1.36}}
 +
{{#set: gene associated=Tiso_gene_3811}}
 +
{{#set: in pathway=PWY-922|PWY-6174|PWY-7391}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 19:46, 18 March 2018

Reaction MEVALONATE-KINASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • mevalonate_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 (R)-mevalonate[c] <=> 1 ADP[c] + 1 H+[c] + 1 (R)-mevalonate 5-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-922, mevalonate pathway I: PWY-922
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6174, mevalonate pathway II (archaea): PWY-6174
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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