Difference between revisions of "Tiso gene 18780"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOLO-ACP-SYNTH-RXN HOLO-ACP-SYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4_-phosph...")
(Created page with "Category:Gene == Gene Tiso_gene_4650 == * left end position: ** 82 * transcription direction: ** NEGATIVE * right end position: ** 3399 * centisome position: ** 0.56145155...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOLO-ACP-SYNTH-RXN HOLO-ACP-SYNTH-RXN] ==
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== Gene Tiso_gene_4650 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 82
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* common name:
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* transcription direction:
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** 4_-phosphopantetheinyl_transferase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.8.7 EC-2.7.8.7]
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** 3399
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* centisome position:
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** 0.56145155   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[3.1.1.64-RXN]]
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** 1 [[apo-ACP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[3-5-ADP]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 an apo-[acyl-carrier protein][c] '''+''' 1 coenzyme A[c] '''=>''' 1 H+[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 adenosine 3',5'-bisphosphate[c]
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** [[pantograph]]-[[esiliculosus]]
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* [[ACETYLCHOLINESTERASE-RXN]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* [[Tiso_gene_12201]]
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* [[ACYLCARNITINE-HYDROLASE-RXN]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***AUTOMATED-NAME-MATCH
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***ec-number
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* [[CARBOXYLESTERASE-RXN]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-10711]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-10767]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-12252]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-12575]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXNQT-4366]]
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** in-silico_annotation
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***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14278]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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* [[PWY-6857]]
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***EC-NUMBER
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* [[PWY-6303]]
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== Pathways ==
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−
* [[PWY-6012-1]], acyl carrier protein activation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6012-1 PWY-6012-1]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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−
* [[PWY-6012]], acyl carrier protein metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6012 PWY-6012]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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−
* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=82}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01625 R01625]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=3399}}
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** [http://www.uniprot.org/uniprot/Q9PMP8 Q9PMP8]
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{{#set: centisome position=0.56145155    }}
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** [http://www.uniprot.org/uniprot/P24224 P24224]
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{{#set: reaction associated=3.1.1.64-RXN|ACETYLCHOLINESTERASE-RXN|ACYLCARNITINE-HYDROLASE-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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** [http://www.uniprot.org/uniprot/O84102 O84102]
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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** [http://www.uniprot.org/uniprot/Q9RQW2 Q9RQW2]
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** [http://www.uniprot.org/uniprot/O83800 O83800]
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** [http://www.uniprot.org/uniprot/Q9ZCX5 Q9ZCX5]
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** [http://www.uniprot.org/uniprot/Q9ZL36 Q9ZL36]
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** [http://www.uniprot.org/uniprot/O25488 O25488]
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** [http://www.uniprot.org/uniprot/P96618 P96618]
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** [http://www.uniprot.org/uniprot/O66995 O66995]
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** [http://www.uniprot.org/uniprot/P0A4W8 P0A4W8]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=4_-phosphopantetheinyl_transferase}}
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{{#set: ec number=EC-2.7.8.7}}
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{{#set: gene associated=Tiso_gene_12201|Tiso_gene_14278}}
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{{#set: in pathway=PWY-6012-1|PWY-6012}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 19:46, 18 March 2018

Gene Tiso_gene_4650

  • left end position:
    • 82
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3399
  • centisome position:
    • 0.56145155
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18780&oldid=26732"