Difference between revisions of "RXN-13306"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OXALODECARB-RXN OXALODECARB-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
(Created page with "Category:Gene == Gene Tiso_gene_15757 == * left end position: ** 1224 * transcription direction: ** NEGATIVE * right end position: ** 4795 * centisome position: ** 25.3994...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OXALODECARB-RXN OXALODECARB-RXN] ==
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== Gene Tiso_gene_15757 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1224
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.1.1.38 EC-1.1.1.38]
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** NEGATIVE
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** [http://enzyme.expasy.org/EC/4.1.1.3 EC-4.1.1.3]
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* right end position:
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** 4795
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* centisome position:
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** 25.399462   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[SUPEROX-DISMUT-RXN]]
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** 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PYRUVATE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 oxaloacetate[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 pyruvate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_12200]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12896]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Pathways associated ==
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* [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation: [http://metacyc.org/META/NEW-IMAGE?object=METHYLGALLATE-DEGRADATION-PWY METHYLGALLATE-DEGRADATION-PWY]
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* [[DETOX1-PWY-1]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6854]]
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* [[PWY-6339]], syringate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6339 PWY-6339]
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* [[DETOX1-PWY]]
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** '''1''' reactions found over '''11''' reactions in the full pathway
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* [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway): [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1224}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15641 15641]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4795}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00217 R00217]
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{{#set: centisome position=25.399462    }}
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* UNIPROT:
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{{#set: reaction associated=SUPEROX-DISMUT-RXN}}
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** [http://www.uniprot.org/uniprot/P13187 P13187]
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{{#set: pathway associated=DETOX1-PWY-1|PWY-6854|DETOX1-PWY}}
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** [http://www.uniprot.org/uniprot/P13155 P13155]
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** [http://www.uniprot.org/uniprot/P13156 P13156]
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** [http://www.uniprot.org/uniprot/Q58628 Q58628]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.1.1.38}}
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{{#set: ec number=EC-4.1.1.3}}
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{{#set: gene associated=Tiso_gene_12200|Tiso_gene_12896}}
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{{#set: in pathway=METHYLGALLATE-DEGRADATION-PWY|PWY-6339|P184-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Revision as of 18:46, 18 March 2018

Gene Tiso_gene_15757

  • left end position:
    • 1224
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4795
  • centisome position:
    • 25.399462
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13306&oldid=26737"