Difference between revisions of "ADEC"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13181 RXN-13181] == * direction: ** LEFT-TO-RIGHT * common name: ** sialate_o-acetylesterase-li...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-NADH-RXN GLUTAMATE-SYNTHASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * ec numb...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13181 RXN-13181] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-NADH-RXN GLUTAMATE-SYNTHASE-NADH-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** sialate_o-acetylesterase-like_protein
 
−
** ORF
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.53 EC-3.1.1.53]
+
** [http://enzyme.expasy.org/EC/1.4.1.14 EC-1.4.1.14]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-414]][c] '''=>''' 1 [[N-ACETYLNEURAMINATE]][c] '''+''' 1 [[ACET]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[NAD]][c] '''+''' 2 [[GLT]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 N-acetyl-4-O-acetylneuraminate[c] '''=>''' 1 N-acetylneuraminate[c] '''+''' 1 acetate[c] '''+''' 1 H+[c]
+
** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 L-glutamine[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 NAD+[c] '''+''' 2 L-glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17029]]
+
* [[Tiso_gene_2581]]
−
** IN-SILICO_ANNOTATION
+
** [[pantograph]]-[[athaliana]]
−
***EC-NUMBER
+
** [[pantograph]]-[[synechocystis]]
−
* [[Tiso_gene_4418]]
+
** [[pantograph]]-[[esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
** [[pantograph]]-[[creinhardtii]]
−
***EC-NUMBER
+
** [[pantograph]]-[[creinhardtii]]
−
* [[Tiso_gene_4419]]
+
* [[Tiso_gene_1154]]
−
** IN-SILICO_ANNOTATION
+
** [[pantograph]]-[[synechocystis]]
−
***EC-NUMBER
+
* [[Tiso_gene_11511]]
 +
** [[pantograph]]-[[synechocystis]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[GLUGLNSYN-PWY]], L-glutamate biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=GLUGLNSYN-PWY GLUGLNSYN-PWY]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6963]], ammonia assimilation cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6963 PWY-6963]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25567 25567]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13753 13753]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00093 R00093]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9RXX2 Q9RXX2]
 +
** [http://www.uniprot.org/uniprot/Q03460 Q03460]
 +
** [http://www.uniprot.org/uniprot/Q22275 Q22275]
 +
** [http://www.uniprot.org/uniprot/O61143 O61143]
 +
** [http://www.uniprot.org/uniprot/Q9C102 Q9C102]
 +
** [http://www.uniprot.org/uniprot/Q9P540 Q9P540]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=sialate_o-acetylesterase-like_protein}}
+
{{#set: ec number=EC-1.4.1.14}}
−
{{#set: common name=ORF}}
+
{{#set: gene associated=Tiso_gene_2581|Tiso_gene_1154|Tiso_gene_11511}}
−
{{#set: ec number=EC-3.1.1.53}}
+
{{#set: in pathway=GLUGLNSYN-PWY|PWY-6963}}
−
{{#set: gene associated=Tiso_gene_17029|Tiso_gene_4418|Tiso_gene_4419}}
+
{{#set: reconstruction category=orthology|manual}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|manual-primary_network|orthology-esiliculosus|orthology-synechocystis}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:47, 18 March 2018

Reaction GLUTAMATE-SYNTHASE-NADH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADH[c] + 1 L-glutamine[c] + 1 2-oxoglutarate[c] => 1 NAD+[c] + 2 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • GLUGLNSYN-PWY, L-glutamate biosynthesis IV: GLUGLNSYN-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6963, ammonia assimilation cycle I: PWY-6963
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ADEC&oldid=26854"