Difference between revisions of "3.2.1.39-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16910 RXN-16910] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl_phosphate_synthet...")
(Created page with "Category:Gene == Gene Tiso_gene_8987 == * left end position: ** 8446 * transcription direction: ** POSITIVE * right end position: ** 9686 * centisome position: ** 86.91089...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16910 RXN-16910] ==
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== Gene Tiso_gene_8987 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 8446
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* common name:
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* transcription direction:
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** carbamoyl_phosphate_synthetase
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** POSITIVE
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** protein_pyr1-3
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* right end position:
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** 9686
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* centisome position:
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** 86.91089   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[R4-RXN]]
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** 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-18238]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CARBAMATE]][c] '''+''' 2 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 ammonium[c] '''+''' 1 carboxyphosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 carbamate[c] '''+''' 2 H+[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_4975]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4976]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4685]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-7693]], guadinomine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7693 PWY-7693]
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** '''3''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=8446}}
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{{#set: common name=carbamoyl_phosphate_synthetase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=protein_pyr1-3}}
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{{#set: right end position=9686}}
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{{#set: gene associated=Tiso_gene_4975|Tiso_gene_4976|Tiso_gene_4685}}
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{{#set: centisome position=86.91089    }}
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{{#set: in pathway=PWY-7693}}
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{{#set: reaction associated=R4-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:48, 18 March 2018

Gene Tiso_gene_8987

  • left end position:
    • 8446
  • transcription direction:
    • POSITIVE
  • right end position:
    • 9686
  • centisome position:
    • 86.91089
  • Synonym(s):

Reactions associated

  • R4-RXN
    • in-silico_annotation
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3.2.1.39-RXN&oldid=26993"