Difference between revisions of "BETA-TOCOPHEROL"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-PEROXIDASE-RXN GLUTATHIONE-PEROXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] == * direction: ** REVERSIBLE * common name: ** bifunctional_c...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-PEROXIDASE-RXN GLUTATHIONE-PEROXIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** glutathione_peroxidase
+
** bifunctional_chorismate_mutase_prephenate_dehydratase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.11.1.9 EC-1.11.1.9]
+
** [http://enzyme.expasy.org/EC/5.4.99.5 EC-5.4.99.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[GLUTATHIONE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[OXIDIZED-GLUTATHIONE]][c]
+
** 1 [[CHORISMATE]][c] '''<=>''' 1 [[PREPHENATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 glutathione[c] '''+''' 1 hydrogen peroxide[c] '''=>''' 2 H2O[c] '''+''' 1 glutathione disulfide[c]
+
** 1 chorismate[c] '''<=>''' 1 prephenate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8644]]
+
* [[Tiso_gene_5940]]
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6679]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_1377]]
+
** [[pantograph]]-[[athaliana]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6680]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[synechocystis]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
+
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-4081]], glutathione-peroxide redox reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4081 PWY-4081]
+
* [[PWY-6120]], L-tyrosine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6120 PWY-6120]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3462]], L-phenylalanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3462 PWY-3462]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3461]], L-tyrosine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3461 PWY-3461]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7626]], bacilysin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7626 PWY-7626]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6627]], salinosporamide A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6627 PWY-6627]
 +
** '''1''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[synechocystis]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
** Source: [[orthology-creinhardtii]]
−
* [[annotation]]:
+
*** Tool: [[pantograph]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16833 16833]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13897 13897]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00274 R00274]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01715 R01715]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q7M355 Q7M355]
+
** [http://www.uniprot.org/uniprot/P19080 P19080]
−
** [http://www.uniprot.org/uniprot/P18283 P18283]
+
** [http://www.uniprot.org/uniprot/P27603 P27603]
−
** [http://www.uniprot.org/uniprot/P46412 P46412]
+
** [http://www.uniprot.org/uniprot/P32178 P32178]
−
** [http://www.uniprot.org/uniprot/Q64625 Q64625]
+
** [http://www.uniprot.org/uniprot/P43900 P43900]
−
** [http://www.uniprot.org/uniprot/P0A0T5 P0A0T5]
+
** [http://www.uniprot.org/uniprot/Q9RQV7 Q9RQV7]
−
** [http://www.uniprot.org/uniprot/P0A0T4 P0A0T4]
+
** [http://www.uniprot.org/uniprot/P21204 P21204]
−
** [http://www.uniprot.org/uniprot/P22352 P22352]
+
** [http://www.uniprot.org/uniprot/Q58029 Q58029]
−
** [http://www.uniprot.org/uniprot/P23764 P23764]
+
** [http://www.uniprot.org/uniprot/Q57696 Q57696]
−
** [http://www.uniprot.org/uniprot/P37141 P37141]
+
** [http://www.uniprot.org/uniprot/P43902 P43902]
−
** [http://www.uniprot.org/uniprot/P00435 P00435]
+
** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
−
** [http://www.uniprot.org/uniprot/P07203 P07203]
+
** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
−
** [http://www.uniprot.org/uniprot/P11352 P11352]
+
** [http://www.uniprot.org/uniprot/P07023 P07023]
−
** [http://www.uniprot.org/uniprot/P04041 P04041]
+
** [http://www.uniprot.org/uniprot/Q02286 Q02286]
−
** [http://www.uniprot.org/uniprot/P11909 P11909]
+
** [http://www.uniprot.org/uniprot/Q02287 Q02287]
−
** [http://www.uniprot.org/uniprot/P30708 P30708]
+
** [http://www.uniprot.org/uniprot/P42738 P42738]
−
** [http://www.uniprot.org/uniprot/P67878 P67878]
+
** [http://www.uniprot.org/uniprot/O22409 O22409]
−
** [http://www.uniprot.org/uniprot/P28714 P28714]
+
** [http://www.uniprot.org/uniprot/O22410 O22410]
−
** [http://www.uniprot.org/uniprot/P30710 P30710]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/Q06652 Q06652]
+
{{#set: common name=bifunctional_chorismate_mutase_prephenate_dehydratase}}
−
** [http://www.uniprot.org/uniprot/P38143 P38143]
+
{{#set: ec number=EC-5.4.99.5}}
−
** [http://www.uniprot.org/uniprot/P40581 P40581]
+
{{#set: gene associated=Tiso_gene_5940}}
−
** [http://www.uniprot.org/uniprot/Q38703 Q38703]
+
{{#set: in pathway=PHESYN|PWY-6120|PWY-3462|PWY-3461|PWY-7626|TYRSYN|PWY-6627}}
−
** [http://www.uniprot.org/uniprot/P35666 P35666]
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
** [http://www.uniprot.org/uniprot/P67877 P67877]
+
{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|manual-primary_network|orthology-esiliculosus}}
−
** [http://www.uniprot.org/uniprot/Q7M448 Q7M448]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P73824 P73824]
+
−
** [http://www.uniprot.org/uniprot/Q9SZ54 Q9SZ54]
+
−
** [http://www.uniprot.org/uniprot/O24296 O24296]
+
−
** [http://www.uniprot.org/uniprot/O24032 O24032]
+
−
** [http://www.uniprot.org/uniprot/O22448 O22448]
+
−
** [http://www.uniprot.org/uniprot/O23968 O23968]
+
−
** [http://www.uniprot.org/uniprot/O23970 O23970]
+
−
** [http://www.uniprot.org/uniprot/Q98234 Q98234]
+
−
** [http://www.uniprot.org/uniprot/O59858 O59858]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=glutathione_peroxidase}}
+
−
{{#set: ec number=EC-1.11.1.9}}
+
−
{{#set: gene associated=Tiso_gene_8644|Tiso_gene_6679|Tiso_gene_1377|Tiso_gene_6680}}
+
−
{{#set: in pathway=DETOX1-PWY-1|PWY-4081}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis|esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:48, 18 March 2018

Reaction CHORISMATEMUT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • bifunctional_chorismate_mutase_prephenate_dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 chorismate[c] <=> 1 prephenate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PHESYN, L-phenylalanine biosynthesis I: PHESYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6120, L-tyrosine biosynthesis III: PWY-6120
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3462, L-phenylalanine biosynthesis II: PWY-3462
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3461, L-tyrosine biosynthesis II: PWY-3461
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7626, bacilysin biosynthesis: PWY-7626
    • 1 reactions found over 10 reactions in the full pathway
  • TYRSYN, L-tyrosine biosynthesis I: TYRSYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6627, salinosporamide A biosynthesis: PWY-6627
    • 1 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





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