Difference between revisions of "1.8.4.8-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-163 RXN1F-163] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_6458 == * left end position: ** 1597 * transcription direction: ** POSITIVE * right end position: ** 6768 * centisome position: ** 13.08587...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-163 RXN1F-163] ==
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== Gene Tiso_gene_6458 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1597
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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** POSITIVE
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* right end position:
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** 6768
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* centisome position:
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** 13.085874   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[2.7.7.11-RXN]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-97]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD1F-120]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 gibberellin A15 (open lactone form)[c] '''=>''' 1 H2O[c] '''+''' 1 gibberellin A24[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
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* [[2.7.7.44-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[GLUC1PURIDYLTRANS-RXN]]
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* [[Tiso_gene_3330]]
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** in-silico_annotation
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** [[pantograph]]-[[athaliana]]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[NAG1P-URIDYLTRANS-RXN]]
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== Pathways  ==
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** in-silico_annotation
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* [[PWY-5070]], gibberellin biosynthesis I (non C-3, non C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070]
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***ec-number
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[UTPHEXPURIDYLYLTRANS-RXN]]
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== Reconstruction information  ==
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** in-silico_annotation
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* [[orthology]]:
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***ec-number
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** [[pantograph]]:
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== Pathways associated ==
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*** [[athaliana]]
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* [[UDPNACETYLGALSYN-PWY]]
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*** [[esiliculosus]]
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* [[PWY-7238]]
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* [[PWY0-1261]]
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* [[UDPNAGSYN-PWY]]
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* [[PWY-7343]]
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* [[PWY-3801]]
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* [[PWY-3821]]
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* [[PWY-7817]]
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* [[PWY-5514]]
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* [[PWY-6527]]
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* [[PWY-4841]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1597}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06323 R06323]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6768}}
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{{#set: ec number=EC-1.14.11}}
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{{#set: centisome position=13.085874    }}
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{{#set: gene associated=Tiso_gene_3330}}
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{{#set: reaction associated=2.7.7.11-RXN|2.7.7.44-RXN|GLUC1PURIDYLTRANS-RXN|NAG1P-URIDYLTRANS-RXN|UTPHEXPURIDYLYLTRANS-RXN}}
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{{#set: in pathway=PWY-5070}}
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{{#set: pathway associated=UDPNACETYLGALSYN-PWY|PWY-7238|PWY0-1261|UDPNAGSYN-PWY|PWY-7343|PWY-3801|PWY-3821|PWY-7817|PWY-5514|PWY-6527|PWY-4841}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Revision as of 18:48, 18 March 2018

Gene Tiso_gene_6458

  • left end position:
    • 1597
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6768
  • centisome position:
    • 13.085874
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=1.8.4.8-RXN&oldid=27016"