Difference between revisions of "Tiso gene 17185"

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(Created page with "Category:Gene == Gene Tiso_gene_9243 == * left end position: ** 3735 * transcription direction: ** NEGATIVE * right end position: ** 9449 * centisome position: ** 39.35307...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_mitochondrial ** cys...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_9243 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] ==
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* left end position:
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* direction:
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** 3735
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** cysteine_mitochondrial
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* right end position:
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** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
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** 9449
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
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** 39.353073   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ATPASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CYS]][c] '''+''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''=>''' 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
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***ec-number
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* With common name(s):
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** 1 L-cysteine[c] '''+''' 1 an [L-cysteine desulfurase]-L-cysteine[c] '''=>''' 1 an [L-cysteine desulfurase] L-cysteine persulfide[c] '''+''' 1 L-alanine[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-12195]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_11478]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN-12196]]
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***EC-NUMBER
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** in-silico_annotation
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** EXPERIMENTAL_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN0-5462]]
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** [[pantograph]]-[[esiliculosus]]
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** in-silico_annotation
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* [[Tiso_gene_14710]]
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***ec-number
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** EXPERIMENTAL_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[PWY-7184]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-7198]]
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* [[Tiso_gene_4284]]
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* [[PWY-6545]]
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** IN-SILICO_ANNOTATION
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* [[PWY-7210]]
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3735}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
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{{#set: right end position=9449}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=39.353073    }}
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{{#set: common name=cysteine_mitochondrial}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: ec number=EC-2.8.1.7}}
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{{#set: gene associated=Tiso_gene_11478|Tiso_gene_14710|Tiso_gene_4284}}
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{{#set: in pathway=PWY0-1021|PWY-6892|PWY-6891|PWY-6823}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:49, 18 March 2018

Reaction RXN0-308

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cysteine_mitochondrial
    • cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1021, L-alanine biosynthesis III: PWY0-1021
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria): PWY-6892
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6891, thiazole biosynthesis II (aerobic bacteria): PWY-6891
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6823, molybdenum cofactor biosynthesis: PWY-6823
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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