Difference between revisions of "TRANS-RXN-189"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMDH IMDH] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-isopropylmalate dehydrogenase * Syn...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSEPHOSPHA-RXN TREHALOSEPHOSPHA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** treha...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSEPHOSPHA-RXN TREHALOSEPHOSPHA-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** 3- | + | ** trehalose-phosphatase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 | + | ** 1 [[WATER]][c] '''+''' 1 [[TREHALOSE-6P]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[TREHALOSE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H2O[c] '''+''' 1 α,α-trehalose 6-phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 α,α-trehalose[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[Tiso_gene_10840]] |
| − | ** [[pantograph]]-[[ | + | ** [[pantograph]]-[[esiliculosus]] |
| + | * [[Tiso_gene_14220]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
| + | ** [[pantograph]]-[[athaliana]] | ||
| + | ** [[pantograph]]-[[esiliculosus]] | ||
| + | * [[Tiso_gene_18196]] | ||
| + | ** [[pantograph]]-[[athaliana]] | ||
== Pathways == | == Pathways == | ||
| + | * [[TRESYN-PWY]], trehalose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TRESYN-PWY TRESYN-PWY] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[TREHALOSESYN-PWY]], trehalose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSESYN-PWY TREHALOSESYN-PWY] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-881]], trehalose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-881 PWY-881] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-athaliana]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23420 23420] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R02778 R02778] | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R06228 R06228] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P31678 P31678] | ||
| + | ** [http://www.uniprot.org/uniprot/P31688 P31688] | ||
| + | ** [http://www.uniprot.org/uniprot/Q00786 Q00786] | ||
| + | ** [http://www.uniprot.org/uniprot/P78875 P78875] | ||
| + | ** [http://www.uniprot.org/uniprot/O64896 O64896] | ||
| + | ** [http://www.uniprot.org/uniprot/O64897 O64897] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=trehalose-phosphatase}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-3.1.3.12}} |
| − | {{#set: in pathway=}} | + | {{#set: gene associated=Tiso_gene_10840|Tiso_gene_14220|Tiso_gene_18196}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: in pathway=TRESYN-PWY|TREHALOSESYN-PWY|PWY-881}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 19:49, 18 March 2018
Contents
Reaction TREHALOSEPHOSPHA-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- trehalose-phosphatase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 TREHALOSE-6P[c] => 1 Pi[c] + 1 TREHALOSE[c]
- With common name(s):
- 1 H2O[c] + 1 α,α-trehalose 6-phosphate[c] => 1 phosphate[c] + 1 α,α-trehalose[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_10840
- Tiso_gene_14220
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- pantograph-athaliana
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
- Tiso_gene_18196
Pathways
- TRESYN-PWY, trehalose biosynthesis I: TRESYN-PWY
- 2 reactions found over 2 reactions in the full pathway
- TREHALOSESYN-PWY, trehalose biosynthesis III: TREHALOSESYN-PWY
- 1 reactions found over 2 reactions in the full pathway
- PWY-881, trehalose biosynthesis II: PWY-881
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
