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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] == | + | == Gene Tiso_gene_16772 == |
| − | * direction: | + | * left end position: |
| − | ** LEFT-TO-RIGHT | + | ** 376 |
| − | * common name: | + | * transcription direction: |
| − | ** proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline) | + | ** POSITIVE |
| − | * ec number: | + | * right end position: |
| − | ** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11] | + | ** 1379 |
| | + | * centisome position: |
| | + | ** 9.106321 |
| | * Synonym(s): | | * Synonym(s): |
| − | ** prolyl hydroxylase
| |
| − | ** prolyl 4-hydroxylase
| |
| − | ** proline,2-oxoglutarate 4-dioxygenase
| |
| − | ** proline hydroxylase
| |
| − | ** protocollagen hydroxylase
| |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * [[2.4.1.83-RXN]] |
| − | ** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PRO]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[4-HYDROXY-L-PROLINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
| + | ** in-silico_annotation |
| − | * With common name(s):
| + | ***ec-number |
| − | ** 1 oxygen[c] '''+''' 1 L-proline[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 trans-4-hydroxy-L-proline[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_2158]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_17593]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[Tiso_gene_18145]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[Tiso_gene_18933]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_6296]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_2280]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_19638]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_18208]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_292]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_9873]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_18235]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_1468]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_15594]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_9035]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_15328]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_16842]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_3021]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_9227]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_16122]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_17919]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_17823]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_18689]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_8652]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_9455]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_9165]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_9636]]
| + | |
| | ** [[pantograph]]-[[esiliculosus]] | | ** [[pantograph]]-[[esiliculosus]] |
| − | * [[Tiso_gene_13008]] | + | * [[RXN-16602]] |
| − | ** [[pantograph]]-[[athaliana]] | + | ** in-silico_annotation |
| − | ** [[pantograph]]-[[creinhardtii]] | + | ***ec-number |
| − | == Pathways == | + | == Pathways associated == |
| − | == Reconstruction information ==
| + | * [[PWY-7661]] |
| − | * [[orthology]]: | + | * [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]] |
| − | ** [[pantograph]]:
| + | |
| − | *** [[creinhardtii]]
| + | |
| − | *** [[athaliana]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN:
| + | {{#set: left end position=376}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252]
| + | {{#set: transcription direction=POSITIVE}} |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | {{#set: right end position=1379}} |
| − | {{#set: common name=proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline)}} | + | {{#set: centisome position=9.106321 }} |
| − | {{#set: ec number=EC-1.14.11}} | + | {{#set: reaction associated=2.4.1.83-RXN|RXN-16602}} |
| − | {{#set: common name=prolyl hydroxylase|prolyl 4-hydroxylase|proline,2-oxoglutarate 4-dioxygenase|proline hydroxylase|protocollagen hydroxylase}} | + | {{#set: pathway associated=PWY-7661|MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}} |
| − | {{#set: gene associated=Tiso_gene_2158|Tiso_gene_17593|Tiso_gene_18145|Tiso_gene_18933|Tiso_gene_6296|Tiso_gene_2280|Tiso_gene_19638|Tiso_gene_18208|Tiso_gene_292|Tiso_gene_9873|Tiso_gene_18235|Tiso_gene_1468|Tiso_gene_15594|Tiso_gene_9035|Tiso_gene_15328|Tiso_gene_16842|Tiso_gene_3021|Tiso_gene_9227|Tiso_gene_16122|Tiso_gene_17919|Tiso_gene_17823|Tiso_gene_18689|Tiso_gene_8652|Tiso_gene_9455|Tiso_gene_9165|Tiso_gene_9636|Tiso_gene_13008}} | + | |
| − | {{#set: in pathway=}} | + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
