Difference between revisions of "Damaged-DNA-Pyrimidine"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.98-RXN 3.5.1.98-RXN] == * direction: ** REVERSIBLE * common name: ** sir2-family_protein_hdac...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN] == * direction: ** LEFT-TO...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN] == |
* direction: | * direction: | ||
− | ** | + | ** LEFT-TO-RIGHT |
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* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.1.3.4 EC-4.1.3.4] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[3-KETOBUTYRATE]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 acetoacetate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * [[Tiso_gene_3769]] |
− | + | ** [[pantograph]]-[[athaliana]] | |
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** [[pantograph]]-[[esiliculosus]] | ** [[pantograph]]-[[esiliculosus]] | ||
== Pathways == | == Pathways == | ||
+ | * [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5074]], mevalonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5074 PWY-5074] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[orthology]]: | + | * Category: [[orthology]] |
− | ** [[pantograph]]: | + | ** Source: [[orthology-athaliana]] |
− | *** [[ | + | *** Tool: [[pantograph]] |
− | * [[annotation]] | + | ** Source: [[orthology-esiliculosus]] |
− | ** [[ | + | *** Tool: [[pantograph]] |
− | *** [[ | + | * Category: [[annotation]] |
− | ** | + | ** Source: [[annotation-experimental_annotation]] |
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | + | * RHEA: | |
− | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24404 24404] | |
− | + | * LIGAND-RXN: | |
− | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01360 R01360] | |
− | + | * UNIPROT: | |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P35914 P35914] |
− | {{#set: ec number=EC- | + | ** [http://www.uniprot.org/uniprot/P35915 P35915] |
− | {{#set: gene associated= | + | ** [http://www.uniprot.org/uniprot/Q8L7K2 Q8L7K2] |
− | {{#set: in pathway=}} | + | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: reconstruction category=orthology | + | {{#set: ec number=EC-4.1.3.4}} |
− | + | {{#set: gene associated=Tiso_gene_3769}} | |
− | {{#set: reconstruction source=esiliculosus | + | {{#set: in pathway=PWY66-367|LEU-DEG2-PWY|PWY-5074}} |
− | + | {{#set: reconstruction category=orthology|annotation}} | |
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}} |
− | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 18:51, 18 March 2018
Contents
Reaction HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 3-HYDROXY-3-METHYL-GLUTARYL-COA[c] => 1 ACETYL-COA[c] + 1 3-KETOBUTYRATE[c]
- With common name(s):
- 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] => 1 acetyl-CoA[c] + 1 acetoacetate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- PWY66-367, ketogenesis: PWY66-367
- 5 reactions found over 5 reactions in the full pathway
- LEU-DEG2-PWY, L-leucine degradation I: LEU-DEG2-PWY
- 6 reactions found over 6 reactions in the full pathway
- PWY-5074, mevalonate degradation: PWY-5074
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links