Difference between revisions of "RX"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGPPHOSPHA-RXN PGPPHOSPHA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** protein-tyrosine_...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-P-BETA-D-RIBOSYL-AMINE 5-P-BETA-D-RIBOSYL-AMINE] == * smiles: ** C(OP([O-])(=O)[O-])C1(C(O)C(...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGPPHOSPHA-RXN PGPPHOSPHA-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-P-BETA-D-RIBOSYL-AMINE 5-P-BETA-D-RIBOSYL-AMINE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(OP([O-])(=O)[O-])C1(C(O)C(O)C([N+])O1)
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* inchi key:
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** InChIKey=SKCBPEVYGOQGJN-TXICZTDVSA-M
 
* common name:
 
* common name:
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** protein-tyrosine_phosphatase_mitochondrial_1
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** 5-phospho-β-D-ribosylamine
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/3.1.3.27 EC-3.1.3.27]
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** 228.118   
 
* Synonym(s):
 
* Synonym(s):
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** 5-P-β-D-ribosylamine
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** PRA
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** 5-phosphoribosylamine
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[GLYRIBONUCSYN-RXN]]
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** 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL]][c] '''+''' 1 [[Pi]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 1-(3-sn-phosphatidyl)-sn-glycerol 3-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 an L-1-phosphatidyl-sn-glycerol[c] '''+''' 1 phosphate[c]
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* [[PRPPAMIDOTRANS-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18092]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-7 PWY4FS-7]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5269]], cardiolipin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5269 PWY-5269]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-5668]], cardiolipin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY0-1545]], cardiolipin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1545 PWY0-1545]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* BIGG : pram
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16725 16725]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266724 45266724]
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** [http://www.genome.jp/dbget-bin/www_bget?R02029 R02029]
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* HMDB : HMDB01128
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P18200 P18200]
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** [http://www.genome.jp/dbget-bin/www_bget?C03090 C03090]
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** [http://www.uniprot.org/uniprot/Q9JRA8 Q9JRA8]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9PM65 Q9PM65]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58681 58681]
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** [http://www.uniprot.org/uniprot/P0A924 P0A924]
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* METABOLIGHTS : MTBLC58681
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: smiles=C(OP([O-])(=O)[O-])C1(C(O)C(O)C([N+])O1)}}
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{{#set: common name=protein-tyrosine_phosphatase_mitochondrial_1}}
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{{#set: inchi key=InChIKey=SKCBPEVYGOQGJN-TXICZTDVSA-M}}
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{{#set: ec number=EC-3.1.3.27}}
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{{#set: common name=5-phospho-β-D-ribosylamine}}
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{{#set: gene associated=Tiso_gene_18092}}
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{{#set: molecular weight=228.118    }}
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{{#set: in pathway=PWY4FS-7|PWY4FS-8|PWY-5269|PWY-7817|PWY-5668|PWY0-1545}}
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{{#set: common name=5-P-β-D-ribosylamine|PRA|5-phosphoribosylamine}}
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{{#set: reconstruction category=annotation}}
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{{#set: consumed by=GLYRIBONUCSYN-RXN}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reversible reaction associated=PRPPAMIDOTRANS-RXN}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:51, 18 March 2018

Metabolite 5-P-BETA-D-RIBOSYL-AMINE

  • smiles:
    • C(OP([O-])(=O)[O-])C1(C(O)C(O)C([N+])O1)
  • inchi key:
    • InChIKey=SKCBPEVYGOQGJN-TXICZTDVSA-M
  • common name:
    • 5-phospho-β-D-ribosylamine
  • molecular weight:
    • 228.118
  • Synonym(s):
    • 5-P-β-D-ribosylamine
    • PRA
    • 5-phosphoribosylamine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • BIGG : pram
  • PUBCHEM:
  • HMDB : HMDB01128
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC58681
"C(OP([O-])(=O)[O-])C1(C(O)C(O)C([N+])O1)" cannot be used as a page name in this wiki.




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