Difference between revisions of "Tiso gene 10459"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRADP PRADP] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosyl-ATP diphosphatase, c...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGPPHOSPHA-RXN PGPPHOSPHA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** protein-tyrosine_...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRADP PRADP] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGPPHOSPHA-RXN PGPPHOSPHA-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** phosphoribosyl-ATP diphosphatase, cytosol
+
** protein-tyrosine_phosphatase_mitochondrial_1
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.27 EC-3.1.3.27]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[PROTON]][c] '''+''' 1.0 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1.0 [[PPI]][c]
+
** 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 1-(5-phospho-β-D-ribosyl)-ATP[c] '''+''' 1.0 H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 1-(5-phospho-β-D-ribosyl)-AMP[c] '''+''' 1.0 diphosphate[c]
+
** 1 1-(3-sn-phosphatidyl)-sn-glycerol 3-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 an L-1-phosphatidyl-sn-glycerol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11297]]
+
* [[Tiso_gene_18092]]
−
** [[pantograph]]-[[creinhardtii]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-7 PWY4FS-7]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5269]], cardiolipin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5269 PWY-5269]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
 +
** '''7''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-5668]], cardiolipin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1545]], cardiolipin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1545 PWY0-1545]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16725 16725]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02029 R02029]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P18200 P18200]
 +
** [http://www.uniprot.org/uniprot/Q9JRA8 Q9JRA8]
 +
** [http://www.uniprot.org/uniprot/Q9PM65 Q9PM65]
 +
** [http://www.uniprot.org/uniprot/P0A924 P0A924]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=phosphoribosyl-ATP diphosphatase, cytosol}}
+
{{#set: common name=protein-tyrosine_phosphatase_mitochondrial_1}}
−
{{#set: gene associated=Tiso_gene_11297}}
+
{{#set: ec number=EC-3.1.3.27}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_18092}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY4FS-7|PWY4FS-8|PWY-5269|PWY-7817|PWY-5668|PWY0-1545}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:52, 18 March 2018

Reaction PGPPHOSPHA-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • protein-tyrosine_phosphatase_mitochondrial_1
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_18092
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

  • PWY4FS-7, phosphatidylglycerol biosynthesis I (plastidic): PWY4FS-7
    • 3 reactions found over 4 reactions in the full pathway
  • PWY4FS-8, phosphatidylglycerol biosynthesis II (non-plastidic): PWY4FS-8
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5269, cardiolipin biosynthesis II: PWY-5269
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus): PWY-7817
    • 7 reactions found over 16 reactions in the full pathway
  • PWY-5668, cardiolipin biosynthesis I: PWY-5668
    • 2 reactions found over 3 reactions in the full pathway
  • PWY0-1545, cardiolipin biosynthesis III: PWY0-1545
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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