Difference between revisions of "2.4.1.32-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_1778 == * left end position: ** 11292 * transcription direction: ** POSITIVE * right end position: ** 15866 * centisome position: ** 52.053...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-527 RXN-527] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_1778 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-527 RXN-527] ==
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* left end position:
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* direction:
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** 11292
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/1.14.11.23 EC-1.14.11.23]
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* right end position:
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** 15866
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* centisome position:
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** 52.05366   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[AMP-DEAMINASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-474]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CPD-520]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c]
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***ec-number
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* With common name(s):
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** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 (+)-taxifolin[c] '''=>''' 1 succinate[c] '''+''' 1 quercetin[c] '''+''' 1 CO2[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3330]]
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** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY-6596]]
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* [[PWY-3101]], flavonol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3101 PWY-3101]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5390]], rutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
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** '''5''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=11292}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02160 R02160]
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{{#set: right end position=15866}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=52.05366    }}
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{{#set: ec number=EC-1.14.11.23}}
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{{#set: reaction associated=AMP-DEAMINASE-RXN}}
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{{#set: gene associated=Tiso_gene_3330}}
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{{#set: pathway associated=PWY-6596}}
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{{#set: in pathway=PWY-3101|PWY-5390|PWY-6787}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 18:52, 18 March 2018

Reaction RXN-527

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3101, flavonol biosynthesis: PWY-3101
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5390, rutin biosynthesis: PWY-5390
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6787, flavonoid biosynthesis (in equisetum): PWY-6787
    • 5 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




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