Difference between revisions of "RXN-13309"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10919 RXN-10919] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-4113 RXN3O-4113] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** OR...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10919 RXN-10919] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-4113 RXN3O-4113] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** polyketide_synthase
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.12 EC-6.2.1.12]
+
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[SINAPATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[SINAPOYL-COA]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[HYDRPHENYLAC-CPD]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[CPD3O-4151]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 sinapate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 sinapoyl-CoA[c] '''+''' 1 AMP[c]
+
** 1 H+[c] '''+''' 1 (4-hydroxyphenyl)acetaldehyde[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 4-tyrosol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12275]]
+
* [[Tiso_gene_6563]]
−
** [[pantograph]]-[[athaliana]]
+
** IN-SILICO_ANNOTATION
−
** [[pantograph]]-[[esiliculosus]]
+
***EC-NUMBER
−
* [[Tiso_gene_14183]]
+
* [[Tiso_gene_5424]]
−
** [[pantograph]]-[[esiliculosus]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_7649]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5425]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6562]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY3O-4108]], L-tyrosine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4108 PWY3O-4108]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6802]], salidroside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6802 PWY-6802]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02221 R02221]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04304 R04304]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.2.1.12}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: gene associated=Tiso_gene_12275|Tiso_gene_14183}}
+
{{#set: common name=ORF}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-1.1.1.1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_6563|Tiso_gene_5424|Tiso_gene_7649|Tiso_gene_5425|Tiso_gene_6562}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY3O-4108|PWY-6802}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:53, 18 March 2018

Reaction RXN3O-4113

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 (4-hydroxyphenyl)acetaldehyde[c] + 1 NADH[c] => 1 NAD+[c] + 1 4-tyrosol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY3O-4108, L-tyrosine degradation III: PWY3O-4108
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6802, salidroside biosynthesis: PWY-6802
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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