Difference between revisions of "RXN-10919"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.3-RXN 3.1.26.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** low_quality_protein:_...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-134 CPD1F-134] == * smiles: ** C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CCC2)([CH](CC3)4)5)(C))...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.3-RXN 3.1.26.3-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-134 CPD1F-134] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CCC2)([CH](CC3)4)5)(C)))C([O-])=O)))
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* inchi key:
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** InChIKey=MHVYWTXXZIFXDT-PKZSZHAESA-M
 
* common name:
 
* common name:
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** low_quality_protein:_ribonuclease_3-like
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** gibberellin A9
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** mini-ribonuclease_3
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* molecular weight:
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** ORF
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** 315.388   
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.26.3 EC-3.1.26.3]
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* Synonym(s):
 
* Synonym(s):
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** C19-GAs
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** closed lactone gibberellin skeleton
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** C19 skeleton
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** C19-GA skeleton
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** C19-gibberellin skeleton
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** GA9
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN1F-165]]
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** 1 [[RNASE-III-MRNA-PROCESSING-SUBSTRATE]][c] '''+''' 2 [[WATER]][c] '''=>''' 2 [[mRNA-Fragments]][c] '''+''' 1 [[RNASE-III-PROCESSING-PRODUCT-MRNA]][c]
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* [[RXN-171]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 RNase III mRNA processing substrate[c] '''+''' 2 H2O[c] '''=>''' 2 an mRNA fragment[c] '''+''' 1 RNase III processing product mRNA[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10649]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10131]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10752]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6282]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10753]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_608]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/Q9PM40 Q9PM40]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244370 25244370]
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** [http://www.uniprot.org/uniprot/P51833 P51833]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9CHD0 Q9CHD0]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=73255 73255]
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** [http://www.uniprot.org/uniprot/Q9JVD3 Q9JVD3]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P44441 P44441]
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** [http://www.genome.jp/dbget-bin/www_bget?C11863 C11863]
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** [http://www.uniprot.org/uniprot/P0A7Y0 P0A7Y0]
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{{#set: smiles=C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CCC2)([CH](CC3)4)5)(C)))C([O-])=O)))}}
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** [http://www.uniprot.org/uniprot/P09155 P09155]
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{{#set: inchi key=InChIKey=MHVYWTXXZIFXDT-PKZSZHAESA-M}}
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** [http://www.uniprot.org/uniprot/Q52698 Q52698]
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{{#set: common name=gibberellin A9}}
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** [http://www.uniprot.org/uniprot/Q49034 Q49034]
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{{#set: molecular weight=315.388    }}
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** [http://www.uniprot.org/uniprot/O69469 O69469]
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{{#set: common name=C19-GAs|closed lactone gibberellin skeleton|C19 skeleton|C19-GA skeleton|C19-gibberellin skeleton|GA9}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: consumed by=RXN1F-165|RXN-171}}
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{{#set: common name=low_quality_protein:_ribonuclease_3-like}}
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{{#set: common name=mini-ribonuclease_3}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.26.3}}
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{{#set: gene associated=Tiso_gene_10649|Tiso_gene_10131|Tiso_gene_10752|Tiso_gene_6282|Tiso_gene_10753|Tiso_gene_608}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:54, 18 March 2018

Metabolite CPD1F-134

  • smiles:
    • C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CCC2)([CH](CC3)4)5)(C)))C([O-])=O)))
  • inchi key:
    • InChIKey=MHVYWTXXZIFXDT-PKZSZHAESA-M
  • common name:
    • gibberellin A9
  • molecular weight:
    • 315.388
  • Synonym(s):
    • C19-GAs
    • closed lactone gibberellin skeleton
    • C19 skeleton
    • C19-GA skeleton
    • C19-gibberellin skeleton
    • GA9

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=C1(C3(CC4(C1)(C([CH]5(C2(C(=O)OC(CCC2)([CH](CC3)4)5)(C)))C([O-])=O)))" cannot be used as a page name in this wiki.



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