Difference between revisions of "Tiso gene 12326"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPYRROLINEDEH-RXN HYDROXYPYRROLINEDEH-RXN] == * direction: ** REVERSIBLE * common name: ** py...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-4-HYDROXY-2-KETO-GLUTARATE D-4-HYDROXY-2-KETO-GLUTARATE] == * smiles: ** C(C(=O)C([O-])=O)C(C...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPYRROLINEDEH-RXN HYDROXYPYRROLINEDEH-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-4-HYDROXY-2-KETO-GLUTARATE D-4-HYDROXY-2-KETO-GLUTARATE] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C(C(=O)C([O-])=O)C(C([O-])=O)O
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* inchi key:
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** InChIKey=WXSKVKPSMAHCSG-UWTATZPHSA-L
 
* common name:
 
* common name:
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** pyrroline-hydroxy-carboxylate dehydrogenase
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** (4R)-4-hydroxy-2-oxoglutarate
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.5.1 EC-1.5.1]
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** 160.083   
 
* Synonym(s):
 
* Synonym(s):
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** D-4-hydroxy-2-ketoglutarate
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** (R)-2-hydroxy-4-oxopentanedioate
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** D-4-hydroxy-2-oxoglutarate
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** D-4-hydroxy-2-keto-glutarate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[R00471]]
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** 2 [[WATER]][c] '''+''' 1 [[PYRROLINE-HYDROXY-CARBOXYLATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[L-ERYTHRO-4-HYDROXY-GLUTAMATE]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 2 H2O[c] '''+''' 1 (3R,5S)-1-pyrroline-3-hydroxy-5-carboxylate[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 erythro-4-hydroxy-L-glutamate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9680]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_6952]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_886]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_3513]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* LIGAND-CPD:
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** [http://www.genome.jp/dbget-bin/www_bget?R04444 R04444]
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** [http://www.genome.jp/dbget-bin/www_bget?C05946 C05946]
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{{#set: direction=REVERSIBLE}}
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* CHEBI:
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{{#set: common name=pyrroline-hydroxy-carboxylate dehydrogenase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62213 62213]
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{{#set: ec number=EC-1.5.1}}
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* METABOLIGHTS : MTBLC62213
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{{#set: gene associated=Tiso_gene_9680|Tiso_gene_6952|Tiso_gene_886|Tiso_gene_3513}}
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* PUBCHEM:
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{{#set: in pathway=}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=52921639 52921639]
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{{#set: reconstruction category=orthology}}
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* HMDB : HMDB60466
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=C(C(=O)C([O-])=O)C(C([O-])=O)O}}
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{{#set: reconstruction source=synechocystis}}
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{{#set: inchi key=InChIKey=WXSKVKPSMAHCSG-UWTATZPHSA-L}}
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{{#set: common name=(4R)-4-hydroxy-2-oxoglutarate}}
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{{#set: molecular weight=160.083    }}
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{{#set: common name=D-4-hydroxy-2-ketoglutarate|(R)-2-hydroxy-4-oxopentanedioate|D-4-hydroxy-2-oxoglutarate|D-4-hydroxy-2-keto-glutarate}}
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{{#set: consumed by=R00471}}

Revision as of 19:00, 18 March 2018

Metabolite D-4-HYDROXY-2-KETO-GLUTARATE

  • smiles:
    • C(C(=O)C([O-])=O)C(C([O-])=O)O
  • inchi key:
    • InChIKey=WXSKVKPSMAHCSG-UWTATZPHSA-L
  • common name:
    • (4R)-4-hydroxy-2-oxoglutarate
  • molecular weight:
    • 160.083
  • Synonym(s):
    • D-4-hydroxy-2-ketoglutarate
    • (R)-2-hydroxy-4-oxopentanedioate
    • D-4-hydroxy-2-oxoglutarate
    • D-4-hydroxy-2-keto-glutarate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC62213
  • PUBCHEM:
  • HMDB : HMDB60466
"C(C(=O)C([O-])=O)C(C([O-])=O)O" cannot be used as a page name in this wiki.



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