Difference between revisions of "TRANS-RXN-21"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15068 RXN-15068] == * direction: ** LEFT-TO-RIGHT * common name: ** phospholipase A2 ** ORF **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTOCHROME-B5-REDUCTASE-RXN CYTOCHROME-B5-REDUCTASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15068 RXN-15068] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTOCHROME-B5-REDUCTASE-RXN CYTOCHROME-B5-REDUCTASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** phospholipase A2
+
** nadh-cytochrome_b5reductase
 
** ORF
 
** ORF
−
** abhydrolase_domain-containing_protein_4-like
+
** cytochrome_b5_reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
+
** [http://enzyme.expasy.org/EC/1.6.2.2 EC-1.6.2.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-8268]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-1-LYSOPHOSPHATIDATE]][c] '''+''' 1 [[OLEATE-CPD]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[NADH]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 dioleoyl phosphatidate[c] '''+''' 1 H2O[c] '''=>''' 1 1-oleyl-2-lyso-phosphatidate[c] '''+''' 1 oleate[c] '''+''' 1 H+[c]
+
** 1 NADH[c] '''+''' 2 a ferricytochrome b5[c] '''=>''' 1 NAD+[c] '''+''' 1 H+[c] '''+''' 2 a ferrocytochrome b5[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12959]]
+
* [[Tiso_gene_7152]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_12960]]
+
* [[Tiso_gene_19905]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_15047]]
+
** [[pantograph]]-[[athaliana]]
 +
* [[Tiso_gene_8773]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_15046]]
+
* [[Tiso_gene_6189]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7417]], phospholipid remodeling (phosphatidate, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7417 PWY-7417]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00100 R00100]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P07514 P07514]
 +
** [http://www.uniprot.org/uniprot/P00387 P00387]
 +
** [http://www.uniprot.org/uniprot/P20070 P20070]
 +
** [http://www.uniprot.org/uniprot/P36060 P36060]
 +
** [http://www.uniprot.org/uniprot/P38626 P38626]
 +
** [http://www.uniprot.org/uniprot/O13809 O13809]
 +
** [http://www.uniprot.org/uniprot/Q9ZNT1 Q9ZNT1]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=phospholipase A2}}
+
{{#set: common name=nadh-cytochrome_b5reductase}}
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
+
{{#set: common name=cytochrome_b5_reductase}}
−
{{#set: ec number=EC-3.1.1.4}}
+
{{#set: ec number=EC-1.6.2.2}}
−
{{#set: gene associated=Tiso_gene_12959|Tiso_gene_12960|Tiso_gene_15047|Tiso_gene_15046}}
+
{{#set: gene associated=Tiso_gene_7152|Tiso_gene_19905|Tiso_gene_8773|Tiso_gene_6189}}
−
{{#set: in pathway=PWY-7417}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 00:02, 19 March 2018

Reaction CYTOCHROME-B5-REDUCTASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nadh-cytochrome_b5reductase
    • ORF
    • cytochrome_b5_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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