Difference between revisions of "PEPPIth"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Nucleoside-Monophosphates Nucleoside-Monophosphates] == * common name: ** a nucleoside 5'-monop...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSINE-KINASE-RXN ADENOSINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF *...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Nucleoside-Monophosphates Nucleoside-Monophosphates] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSINE-KINASE-RXN ADENOSINE-KINASE-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a nucleoside 5'-monophosphate
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.20 EC-2.7.1.20]
 
* Synonym(s):
 
* Synonym(s):
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** mononucleotide
 
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** a nucleoside 5'-phosphate
 
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** NMP
 
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** a nucleoside monophosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[NUCLEOSIDE-PHOSPHATE-KINASE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[ADENOSINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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* [[RXN0-6525]]
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* With common name(s):
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* [[NUCLEOSIDE-DIPHOSPHATASE-RXN]]
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** 1 ATP[c] '''+''' 1 adenosine[c] '''=>''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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* [[RXN0-6479]]
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* [[3.1.4.17-RXN]]
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== Genes associated with this reaction  ==
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* [[RXN-14024]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[3.1.13.1-RXN]]
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* [[Tiso_gene_12078]]
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* [[3.1.26.4-RXN]]
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** IN-SILICO_ANNOTATION
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* [[RXN0-4961]]
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***EC-NUMBER
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* [[3.1.4.1-RXN]]
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** EXPERIMENTAL_ANNOTATION
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* [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
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***EC-NUMBER
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== Reaction(s) of unknown directionality ==
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== Pathways  ==
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* [[PWY-6619]], adenine and adenosine salvage VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6619 PWY-6619]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a nucleoside 5'-monophosphate}}
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* RHEA:
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{{#set: common name=mononucleotide|a nucleoside 5'-phosphate|NMP|a nucleoside monophosphate}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20824 20824]
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{{#set: consumed by=NUCLEOSIDE-PHOSPHATE-KINASE-RXN}}
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* LIGAND-RXN:
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{{#set: produced by=RXN0-6525|NUCLEOSIDE-DIPHOSPHATASE-RXN|RXN0-6479|3.1.4.17-RXN|RXN-14024|3.1.13.1-RXN|3.1.26.4-RXN|RXN0-4961|3.1.4.1-RXN|NUCLEOTIDE-PYROPHOSPHATASE-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00185 R00185]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q64640 Q64640]
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** [http://www.uniprot.org/uniprot/P55263 P55263]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-2.7.1.20}}
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{{#set: gene associated=Tiso_gene_12078}}
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{{#set: in pathway=PWY-6619}}
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{{#set: reconstruction category=manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 01:02, 19 March 2018

Reaction ADENOSINE-KINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 adenosine[c] => 1 AMP[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_12078
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

  • PWY-6619, adenine and adenosine salvage VI: PWY-6619
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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