Difference between revisions of "TYR"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10698 RXN-10698] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKGCITtm AKGCITtm] == * direction: ** REVERSIBLE * common name: ** Dicarboxylate/tricarboxylate car...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10698 RXN-10698] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AKGCITtm AKGCITtm] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
+
** Dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial
−
** 3-hydroxyacyl-_dehydrogenase
+
−
** hydroxyacyl-coenzyme_a_mitochondrial
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-11519]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-11520]][c] '''+''' 1 [[NADH]][c]
+
** 1.0 [[CIT]][m] '''+''' 1.0 [[2-KETOGLUTARATE]][c] '''<=>''' 1.0 [[CIT]][c] '''+''' 1.0 [[2-KETOGLUTARATE]][m]
 
* With common name(s):
 
* With common name(s):
−
** 1 OPC8-3-hydroxyacyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 OPC8-3-ketoacyl-CoA[c] '''+''' 1 NADH[c]
+
** 1.0 citrate[m] '''+''' 1.0 2-oxoglutarate[c] '''<=>''' 1.0 citrate[c] '''+''' 1.0 2-oxoglutarate[m]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14026]]
+
* [[Tiso_gene_14857]]
−
** IN-SILICO_ANNOTATION
+
** [[pantograph]]-[[creinhardtii]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5857]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18839]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14027]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14262]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18838]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
 
−
** '''15''' reactions found over '''19''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
+
{{#set: common name=Dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial}}
−
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
+
{{#set: gene associated=Tiso_gene_14857}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
+
{{#set: in pathway=}}
−
{{#set: ec number=EC-1.1.1.35}}
+
−
{{#set: gene associated=Tiso_gene_14026|Tiso_gene_5857|Tiso_gene_18839|Tiso_gene_14027|Tiso_gene_14262|Tiso_gene_18838}}
+
−
{{#set: in pathway=PWY-735}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 00:03, 19 March 2018

Reaction AKGCITtm

  • direction:
    • REVERSIBLE
  • common name:
    • Dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 citrate[m] + 1.0 2-oxoglutarate[c] <=> 1.0 citrate[c] + 1.0 2-oxoglutarate[m]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TYR&oldid=28462"