Difference between revisions of "Tiso gene 15524"

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(Created page with "Category:Gene == Gene Tiso_gene_5733 == * left end position: ** 6919 * transcription direction: ** POSITIVE * right end position: ** 10303 * centisome position: ** 53.2230...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3521 RXN-3521] == * direction: ** LEFT-TO-RIGHT * common name: ** ascorbate_peroxidase * Synony...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_5733 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3521 RXN-3521] ==
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* left end position:
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* direction:
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** 6919
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ascorbate_peroxidase
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* right end position:
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** 10303
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* centisome position:
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** 53.22308   
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* Synonym(s):
 
* Synonym(s):
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** L-ascorbic acid peroxidase
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** L-ascorbic acid-specific peroxidase
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** ascorbic acid peroxidase
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[6PFRUCTPHOS-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 2 [[PROTON]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[ASCORBATE]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[CPD-318]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 2 H+[c] '''+''' 1 hydrogen peroxide[c] '''+''' 2 L-ascorbate[c] '''=>''' 2 H2O[c] '''+''' 2 monodehydroascorbate radical[c]
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***ec-number
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5435]]
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** [[pantograph]]-[[creinhardtii]]
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** IN-SILICO_ANNOTATION
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* [[RXN0-6541]]
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_15962]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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* [[PWY-1042]]
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***AUTOMATED-NAME-MATCH
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* [[PWY0-1517]]
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* [[Tiso_gene_16028]]
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* [[GLYCOLYSIS]]
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** IN-SILICO_ANNOTATION
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* [[PWY-7385]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-1861]]
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== Pathways  ==
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-2261]], ascorbate glutathione cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2261 PWY-2261]
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* [[PWY-5484]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6919}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30266 30266]
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{{#set: right end position=10303}}
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* LIGAND-RXN:
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{{#set: centisome position=53.22308    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R09540 R09540]
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{{#set: reaction associated=6PFRUCTPHOS-RXN|RXN0-6541}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00644 R00644]
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{{#set: pathway associated=PWY-1042|PWY0-1517|GLYCOLYSIS|PWY-7385|PWY-1861|ANAGLYCOLYSIS-PWY|PWY-5484}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P48534 P48534]
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** [http://www.uniprot.org/uniprot/Q7M287 Q7M287]
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** [http://www.uniprot.org/uniprot/O49159 O49159]
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** [http://www.uniprot.org/uniprot/Q7M3G0 Q7M3G0]
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** [http://www.uniprot.org/uniprot/Q05431 Q05431]
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** [http://www.uniprot.org/uniprot/Q43824 Q43824]
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** [http://www.uniprot.org/uniprot/Q41772 Q41772]
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** [http://www.uniprot.org/uniprot/Q41371 Q41371]
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** [http://www.uniprot.org/uniprot/Q42661 Q42661]
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** [http://www.uniprot.org/uniprot/Q42564 Q42564]
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** [http://www.uniprot.org/uniprot/O46921 O46921]
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** [http://www.uniprot.org/uniprot/P93404 P93404]
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** [http://www.uniprot.org/uniprot/Q9FE01 Q9FE01]
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** [http://www.uniprot.org/uniprot/O65634 O65634]
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** [http://www.uniprot.org/uniprot/Q39843 Q39843]
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** [http://www.uniprot.org/uniprot/O49122 O49122]
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** [http://www.uniprot.org/uniprot/O49822 O49822]
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** [http://www.uniprot.org/uniprot/Q42459 Q42459]
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** [http://www.uniprot.org/uniprot/Q39780 Q39780]
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** [http://www.uniprot.org/uniprot/Q96399 Q96399]
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** [http://www.uniprot.org/uniprot/O81333 O81333]
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** [http://www.uniprot.org/uniprot/O81603 O81603]
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** [http://www.uniprot.org/uniprot/O81604 O81604]
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** [http://www.uniprot.org/uniprot/Q42909 Q42909]
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** [http://www.uniprot.org/uniprot/Q9STM9 Q9STM9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ascorbate_peroxidase}}
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{{#set: common name=L-ascorbic acid peroxidase|L-ascorbic acid-specific peroxidase|ascorbic acid peroxidase}}
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{{#set: gene associated=Tiso_gene_5435|Tiso_gene_15962|Tiso_gene_16028}}
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{{#set: in pathway=PWY-2261}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 01:03, 19 March 2018

Reaction RXN-3521

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ascorbate_peroxidase
  • Synonym(s):
    • L-ascorbic acid peroxidase
    • L-ascorbic acid-specific peroxidase
    • ascorbic acid peroxidase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H+[c] + 1 hydrogen peroxide[c] + 2 L-ascorbate[c] => 2 H2O[c] + 2 monodehydroascorbate radical[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2261, ascorbate glutathione cycle: PWY-2261
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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