Difference between revisions of "NAcMur-4Peptide-NAcGlc-Undecaprenols"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7100 CPD-7100] == * smiles: ** CC(C(C(=O)[O-])C(=O)C(=O)[O-])C * inchi key: ** InChIKey=HII...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16621 RXN-16621] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7100 CPD-7100] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16621 RXN-16621] ==
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* smiles:
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* direction:
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** CC(C(C(=O)[O-])C(=O)C(=O)[O-])C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=HIIZAGQWABAMRR-BYPYZUCNSA-L
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* common name:
 
* common name:
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** (2S)-2-isopropyl-3-oxosuccinate
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** 3-oxoacyl-synthase
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* molecular weight:
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* ec number:
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** 172.137   
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
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** 2-isopropyl-3-oxosuccinate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-7800]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[5Z-tetradec-5-enoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[7Z-3-oxo-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c]
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* [[IMDH]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a (5Z)-tetradec-5-enoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a (7Z)-3-oxo-hexadec-7-enoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c]
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* [[3-ISOPROPYLMALDEHYDROG-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5939]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
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** '''10''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04236 C04236]
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{{#set: common name=3-oxoacyl-synthase}}
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* CHEBI:
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{{#set: ec number=EC-2.3.1.41}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17214 17214]
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{{#set: gene associated=Tiso_gene_5939}}
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* BIGG : 3c4mop
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{{#set: in pathway=PWY-7664}}
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* PUBCHEM:
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{{#set: reconstruction category=annotation}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6419705 6419705]
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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* HMDB : HMDB12149
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=CC(C(C(=O)[O-])C(=O)C(=O)[O-])C}}
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{{#set: inchi key=InChIKey=HIIZAGQWABAMRR-BYPYZUCNSA-L}}
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{{#set: common name=(2S)-2-isopropyl-3-oxosuccinate}}
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{{#set: molecular weight=172.137    }}
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{{#set: common name=2-isopropyl-3-oxosuccinate}}
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{{#set: consumed by=RXN-7800}}
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{{#set: produced by=IMDH}}
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{{#set: consumed or produced by=3-ISOPROPYLMALDEHYDROG-RXN}}
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Revision as of 01:05, 19 March 2018

Reaction RXN-16621

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_5939
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

  • PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NAcMur-4Peptide-NAcGlc-Undecaprenols&oldid=28647"