Difference between revisions of "CPD-9923"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GlcNAc-GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Core GlcNAc-GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Core] == * common...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5189 RXN0-5189] == * direction: ** LEFT-TO-RIGHT * common name: ** dna-3-methyladenine_glycosy...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GlcNAc-GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Core GlcNAc-GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Core] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5189 RXN0-5189] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine
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** dna-3-methyladenine_glycosylase_i
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** 3-methyladenine_dna_glycosylase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.2.20 EC-3.2.2.20]
 
* Synonym(s):
 
* Synonym(s):
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** α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[proteoglycan]
 
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** α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosylproteoglycan
 
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** α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucuronosyl-(1->3)-α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucuronosyl-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein]
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[2.4.1.224-RXN]]
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** 1 [[DNA-3-methyladenines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DNA-containing-aPurinic-Sites]][c] '''+''' 1 [[3-Methyl-Adenines]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 an N3-methyladenine in DNA[c] '''+''' 1 H2O[c] '''=>''' 1 an apurinic site within DNA[c] '''+''' 1 3-methyladenine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_7738]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15814]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[proteoglycan]|α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosylproteoglycan|α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucuronosyl-(1->3)-α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucuronosyl-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein]}}
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{{#set: common name=dna-3-methyladenine_glycosylase_i}}
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{{#set: produced by=2.4.1.224-RXN}}
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{{#set: common name=3-methyladenine_dna_glycosylase}}
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{{#set: ec number=EC-3.2.2.20}}
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{{#set: gene associated=Tiso_gene_7738|Tiso_gene_15814}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 00:05, 19 March 2018

Reaction RXN0-5189

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dna-3-methyladenine_glycosylase_i
    • 3-methyladenine_dna_glycosylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-9923&oldid=28655"