Difference between revisions of "HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-162 RXN1F-162] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17917 RXN-17917] == * direction: ** LEFT-TO-RIGHT * common name: ** dna_ligase ** dna_ligase_mr...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-162 RXN1F-162] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17917 RXN-17917] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
+
** dna_ligase
 +
** dna_ligase_mrna_capping_enzyme
 +
** ORF
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD1F-95]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD1F-97]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[DNA-Ligase-L-lysine]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DNA-Ligase-L-lysine-adenylate]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 gibberellin A12[c] '''=>''' 1 succinate[c] '''+''' 1 CO2[c] '''+''' 1 gibberellin A15 (open lactone form)[c]
+
** 1 ATP[c] '''+''' 1 a [DNA ligase]-L-lysine[c] '''=>''' 1 diphosphate[c] '''+''' 1 H+[c] '''+''' 1 a [DNA ligase]-N6-(5'-adenylyl)-L-lysine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3330]]
+
* [[Tiso_gene_14250]]
−
** [[pantograph]]-[[athaliana]]
+
** IN-SILICO_ANNOTATION
−
** [[pantograph]]-[[esiliculosus]]
+
***EC-NUMBER
 +
* [[Tiso_gene_6743]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3498]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_11251]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14249]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_12142]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5070]], gibberellin biosynthesis I (non C-3, non C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R06322 R06322]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.14.11}}
+
{{#set: common name=dna_ligase}}
−
{{#set: gene associated=Tiso_gene_3330}}
+
{{#set: common name=dna_ligase_mrna_capping_enzyme}}
−
{{#set: in pathway=PWY-5070}}
+
{{#set: common name=ORF}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_14250|Tiso_gene_6743|Tiso_gene_3498|Tiso_gene_11251|Tiso_gene_14249|Tiso_gene_12142}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 00:06, 19 March 2018

Reaction RXN-17917

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dna_ligase
    • dna_ligase_mrna_capping_enzyme
    • ORF
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

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