Difference between revisions of "CPD0-1422"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCPDIESTER-RXN GLYCPDIESTER-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec numb...")
(Created page with "Category:Gene == Gene Tiso_gene_17123 == * left end position: ** 408 * transcription direction: ** NEGATIVE * right end position: ** 2710 * centisome position: ** 5.753772...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCPDIESTER-RXN GLYCPDIESTER-RXN] ==
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== Gene Tiso_gene_17123 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 408
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* common name:
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* transcription direction:
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** ORF
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46]
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** 2710
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* centisome position:
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** 5.7537723   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PGLYCDEHYDROG-RXN]]
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** 1 [[Glycerophosphodiesters]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Alcohols]][c] '''+''' 1 [[GLYCEROL-3P]][c]
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** [[pantograph]]-[[esiliculosus]]
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* With common name(s):
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* [[PSERTRANSAM-RXN]]
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** 1 a glycerophosphodiester[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 an alcohol[c] '''+''' 1 sn-glycerol 3-phosphate[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** experimental_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* [[Tiso_gene_17232]]
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** [[pantograph]]-[[esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[PSERTRANSAMPYR-RXN]]
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***EC-NUMBER
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** in-silico_annotation
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* [[Tiso_gene_5334]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***ec-number
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== Pathways  ==
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-6952]], glycerophosphodiester degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6952 PWY-6952]
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== Pathways associated ==
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[SERSYN-PWY]]
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== Reconstruction information  ==
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* [[PYRIDOXSYN-PWY]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=408}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00857 R00857]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=2710}}
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** [http://www.uniprot.org/uniprot/Q99387 Q99387]
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{{#set: centisome position=5.7537723    }}
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** [http://www.uniprot.org/uniprot/P10908 P10908]
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{{#set: reaction associated=PGLYCDEHYDROG-RXN|PSERTRANSAM-RXN|PSERTRANSAMPYR-RXN}}
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** [http://www.uniprot.org/uniprot/Q06282 Q06282]
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{{#set: pathway associated=SERSYN-PWY|PYRIDOXSYN-PWY}}
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** [http://www.uniprot.org/uniprot/Q9V208 Q9V208]
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** [http://www.uniprot.org/uniprot/P09394 P09394]
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** [http://www.uniprot.org/uniprot/Q9S3K5 Q9S3K5]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.4.46}}
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{{#set: gene associated=Tiso_gene_17232|Tiso_gene_5334}}
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{{#set: in pathway=PWY-6952}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 00:07, 19 March 2018

Gene Tiso_gene_17123

  • left end position:
    • 408
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2710
  • centisome position:
    • 5.7537723
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD0-1422&oldid=28765"