Difference between revisions of "Tiso gene 7736"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12198 RXN-12198] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9633 RXN-9633] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-stearoyl-[acyl-carrier...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12198 RXN-12198] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9633 RXN-9633] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** 3-oxo-stearoyl-[acyl-carrier protein] reductase
 +
** polyketide_synthase
 +
** 3-oxoacyl-(acyl-carrier-protein)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.1.6 EC-3.6.1.6]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-oxo-stearoyl-ACPs]][c] '''=>''' 1 [[R-3-hydroxystearoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 CDP[c] '''+''' 1 H2O[c] '''=>''' 1 CMP[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c]
+
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-stearoyl-[acp][c] '''=>''' 1 a (3R)-3-hydroxystearoyl-[acp][c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12899]]
+
* [[Tiso_gene_13083]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
 
−
* [[Tiso_gene_20236]]
 
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_10876]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_136]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_9885]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_135]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_500]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_13394]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
* Category: [[manual]]
−
* [[annotation]]:
+
** Source: [[manual-primary_network]]
−
** [[pathwaytools]]:
+
* Category: [[annotation]]
−
*** [[experimental_annotation]]
+
** Source: [[annotation-experimental_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00514 R00514]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=3-oxo-stearoyl-[acyl-carrier protein] reductase}}
−
{{#set: ec number=EC-3.6.1.6}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: gene associated=Tiso_gene_12899|Tiso_gene_20236}}
+
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-2.3.1.86}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: gene associated=Tiso_gene_13083|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_9885|Tiso_gene_135|Tiso_gene_500|Tiso_gene_13394}}
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+
{{#set: in pathway=PWY-5989|PWY3O-355}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 00:08, 19 March 2018

Reaction RXN-9633

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-stearoyl-[acyl-carrier protein] reductase
    • polyketide_synthase
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5989, stearate biosynthesis II (bacteria and plants): PWY-5989
    • 5 reactions found over 6 reactions in the full pathway
  • PWY3O-355, stearate biosynthesis III (fungi): PWY3O-355
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

"3-oxo-stearoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.





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