Difference between revisions of "SPERMINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYHYPUSINE-MONOOXYGENASE-RXN DEOXYHYPUSINE-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9524 RXN-9524] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-octanoyl-[acyl-carrier...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYHYPUSINE-MONOOXYGENASE-RXN DEOXYHYPUSINE-MONOOXYGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9524 RXN-9524] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** deoxyhypusine_hydroxylase
+
** 3-oxo-octanoyl-[acyl-carrier protein] reductase
 +
** polyketide_synthase
 +
** 3-oxoacyl-(acyl-carrier-protein)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.99.29 EC-1.14.99.29]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-9973]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[EIF5A-HYPUSINE]][c] '''+''' 1 [[Acceptor]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-Oxo-octanoyl-ACPs]][c] '''=>''' 1 [[3-Hydroxy-octanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an [eIF5A-precursor]-deoxyhypusine[c] '''+''' 1 oxygen[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 H2O[c] '''+''' 1 an [eIF5A]-hypusine[c] '''+''' 1 an oxidized electron acceptor[c]
+
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-octanoyl-[acp][c] '''=>''' 1 a (3R)-3-hydroxyoctanoyl-[acp][c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10811]]
+
* [[Tiso_gene_13083]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_135]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_500]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_13394]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_136]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_9885]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_624]]
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_10876]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_10415]]
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_16579]]
 +
** [[pantograph]]-[[synechocystis]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5905]], hypusine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5905 PWY-5905]
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-synechocystis]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04437 R04437]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=deoxyhypusine_hydroxylase}}
+
{{#set: common name=3-oxo-octanoyl-[acyl-carrier protein] reductase}}
−
{{#set: ec number=EC-1.14.99.29}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: gene associated=Tiso_gene_10811}}
+
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
−
{{#set: in pathway=PWY-5905}}
+
{{#set: ec number=EC-2.3.1.86}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: ec number=EC-2.3.1.85}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: gene associated=Tiso_gene_13083|Tiso_gene_135|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_9885|Tiso_gene_624|Tiso_gene_10876|Tiso_gene_10415|Tiso_gene_16579}}
 +
{{#set: in pathway=PWY-5971|PWY-5994}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 01:08, 19 March 2018

Reaction RXN-9524

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-octanoyl-[acyl-carrier protein] reductase
    • polyketide_synthase
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxo-octanoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.






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