Difference between revisions of "CPD-676"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17846 RXN-17846] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** leucyl_phenylalanyl-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17846 RXN-17846] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** chloroplast_beta-keto_acyl_reductase
+
** ORF
 +
** leucyl_phenylalanyl-trna--protein_transferase
 +
** leucyl_phenylalanyl-trna--protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
+
** [http://enzyme.expasy.org/EC/2.3.2.6 EC-2.3.2.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[CPD-14423]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-14424]][c]
+
** 1 [[Protein-N-terminal-L-Arginine]][c] '''+''' 1 [[Charged-LEU-tRNAs]][c] '''=>''' 1 [[LEU-tRNAs]][c] '''+''' 1 [[L-leucyl-L-arginyl-Protein]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 3-oxo-docosapentaenoyl-CoA[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c]
+
** 1 an N-terminal arginyl-[protein][c] '''+''' 1 an L-leucyl-[tRNAleu][c] '''=>''' 1 a tRNAleu[c] '''+''' 1 a [protein] N-terminal L-leucyl-L-arginine[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9885]]
+
* [[Tiso_gene_8540]]
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_13083]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_9871]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
* [[Tiso_gene_13698]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2584]]
 +
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
+
* [[PWY-7801]], N-end rule pathway I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7801 PWY-7801]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
+
−
** '''14''' reactions found over '''14''' reactions in the full pathway
+
−
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
+
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
+
{{#set: common name=ORF}}
−
{{#set: ec number=EC-1.1.1.330}}
+
{{#set: common name=leucyl_phenylalanyl-trna--protein_transferase}}
−
{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083|Tiso_gene_9871}}
+
{{#set: common name=leucyl_phenylalanyl-trna--protein}}
−
{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
+
{{#set: ec number=EC-2.3.2.6}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_8540|Tiso_gene_13698|Tiso_gene_2584}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY-7801}}
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 00:09, 19 March 2018

Reaction RXN-17846

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • leucyl_phenylalanyl-trna--protein_transferase
    • leucyl_phenylalanyl-trna--protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7801, N-end rule pathway I (prokaryotic): PWY-7801
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-676&oldid=28947"