Difference between revisions of "5.3.1.23-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_7285 == * left end position: ** 4564 * transcription direction: ** POSITIVE * right end position: ** 7400 * centisome position: ** 40.25401...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Photosystem II D2 protein * e...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_7285 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] ==
−
* left end position:
+
* direction:
−
** 4564
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** Photosystem II D2 protein
−
* right end position:
+
* ec number:
−
** 7400
+
** [http://enzyme.expasy.org/EC/1.10.3.9 EC-1.10.3.9]
−
* centisome position:
+
−
** 40.254013   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[FUMARATE-REDUCTASE-NADH-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[Light]][c] '''+''' 2 [[PLASTOQUINONE]][c] '''+''' 2 [[WATER]][c] '''+''' 4 [[PROTON]][e] '''=>''' 4 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[Plastoquinols]][c]
−
***ec-number
+
* With common name(s):
−
** experimental_annotation
+
** 1 hν[c] '''+''' 2 a plastoquinone[c] '''+''' 2 H2O[c] '''+''' 4 H+[e] '''=>''' 4 H+[c] '''+''' 1 oxygen[c] '''+''' 2 a plastoquinol[c]
−
***ec-number
+
 
−
** [[pantograph]]-[[esiliculosus]]
+
== Genes associated with this reaction  ==
−
* [[L-ASPARTATE-OXID-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_5033]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_13951]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[R00357]]
+
== Pathways  ==
−
** [[pantograph]]-[[synechocystis]]
+
* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
−
== Pathways associated ==
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5316]]
+
== Reconstruction information  ==
−
* [[PWY-7342]]
+
* Category: [[orthology]]
−
* [[PYRIDNUCSYN-PWY]]
+
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=4564}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30250 30250]
−
{{#set: right end position=7400}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: centisome position=40.254013    }}
+
{{#set: common name=Photosystem II D2 protein}}
−
{{#set: reaction associated=FUMARATE-REDUCTASE-NADH-RXN|L-ASPARTATE-OXID-RXN|R00357}}
+
{{#set: ec number=EC-1.10.3.9}}
−
{{#set: pathway associated=PWY-5316|PWY-7342|PYRIDNUCSYN-PWY}}
+
{{#set: gene associated=Tiso_gene_5033|Tiso_gene_13951}}
 +
{{#set: in pathway=PWY-101}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 00:11, 19 March 2018

Reaction PSII-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Photosystem II D2 protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-101, photosynthesis light reactions: PWY-101
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=5.3.1.23-RXN&oldid=29077"