Difference between revisions of "Tiso gene 12988"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTKIN-RXN GLUTKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate_5-kinase ** a...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-162 RXN1F-162] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTKIN-RXN GLUTKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-162 RXN1F-162] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** glutamate_5-kinase
 
−
** aspartokinase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.2.11 EC-2.7.2.11]
+
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLT]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-95]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CPD1F-97]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-glutamate[c] '''+''' 1 ATP[c] '''=>''' 1 γ-L-glutamyl 5-phosphate[c] '''+''' 1 ADP[c]
+
** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 gibberellin A12[c] '''=>''' 1 CO2[c] '''+''' 1 succinate[c] '''+''' 1 gibberellin A15 (open lactone form)[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17057]]
+
* [[Tiso_gene_3330]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12021]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_16634]]
+
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
+
* [[PWY-5070]], gibberellin biosynthesis I (non C-3, non C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
+
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[synechocystis]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14877 14877]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00239 R00239]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06322 R06322]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q9PJ29 Q9PJ29]
+
−
** [http://www.uniprot.org/uniprot/Q9CF72 Q9CF72]
+
−
** [http://www.uniprot.org/uniprot/Q9JUK7 Q9JUK7]
+
−
** [http://www.uniprot.org/uniprot/P43763 P43763]
+
−
** [http://www.uniprot.org/uniprot/P0A7B5 P0A7B5]
+
−
** [http://www.uniprot.org/uniprot/P17856 P17856]
+
−
** [http://www.uniprot.org/uniprot/P32264 P32264]
+
−
** [http://www.uniprot.org/uniprot/P73071 P73071]
+
−
** [http://www.uniprot.org/uniprot/O04226 O04226]
+
−
** [http://www.uniprot.org/uniprot/O13810 O13810]
+
−
** [http://www.uniprot.org/uniprot/P46546 P46546]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=glutamate_5-kinase}}
+
{{#set: ec number=EC-1.14.11}}
−
{{#set: common name=aspartokinase}}
+
{{#set: gene associated=Tiso_gene_3330}}
−
{{#set: ec number=EC-2.7.2.11}}
+
{{#set: in pathway=PWY-5070}}
−
{{#set: gene associated=Tiso_gene_17057|Tiso_gene_12021|Tiso_gene_16634}}
+
−
{{#set: in pathway=PWY-6922|PROSYN-PWY|PWY-3341|ARGININE-SYN4-PWY|CITRULBIO-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
 
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction source=primary_network}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 00:11, 19 March 2018

Reaction RXN1F-162

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5070, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation): PWY-5070
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12988&oldid=29093"