Difference between revisions of "Tiso gene 6884"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYL-COA-OXIDASE-RXN ACYL-COA-OXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYL-COA-OXIDASE-RXN ACYL-COA-OXIDASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** nucleoredoxin
+
** acyl-coenzyme_a_oxidase
−
** ORF
+
−
** thioredoxin_reductase_tr1
+
−
** thioredoxin_reductase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.1.9 EC-1.8.1.9]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[Red-Thioredoxin]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[ACYL-COA]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 an oxidized thioredoxin[c] '''+''' 1 NADPH[c] '''=>''' 1 a reduced thioredoxin[c] '''+''' 1 NADP+[c]
+
** 1 oxygen[c] '''+''' 1 an acyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 a trans-2-enoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16927]]
+
* [[Tiso_gene_18566]]
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_475]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15704]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18783]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[THIOREDOX-PWY]], thioredoxin pathway: [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOX-PWY THIOREDOX-PWY]
+
* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[manual]]:
+
* Category: [[annotation]]
−
** [[primary_network]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[annotation]]:
+
*** Tool: [[pathwaytools]]
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* PIR:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52121 T52121]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52120 T52120]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04418 T04418]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S64224 S64224]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S40722 S40722]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXRTA2 OXRTA2]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXRTA1 OXRTA1]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX5 OXCKX5]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX4 OXCKX4]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX OXCKX]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKPM OXCKPM]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKP2 OXCKP2]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKAX OXCKAX]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4563 JC4563]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I38095 I38095]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B54942 B54942]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A54942 A54942]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00388 R00388]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q05741 Q05741]
+
** [http://www.uniprot.org/uniprot/Q15067 Q15067]
−
** [http://www.uniprot.org/uniprot/P56431 P56431]
+
** [http://www.uniprot.org/uniprot/Q00468 Q00468]
−
** [http://www.uniprot.org/uniprot/O28718 O28718]
+
** [http://www.uniprot.org/uniprot/P06598 P06598]
−
** [http://www.uniprot.org/uniprot/P80880 P80880]
+
** [http://www.uniprot.org/uniprot/P11356 P11356]
−
** [http://www.uniprot.org/uniprot/P43496 P43496]
+
** [http://www.uniprot.org/uniprot/P07872 P07872]
−
** [http://www.uniprot.org/uniprot/P94284 P94284]
+
** [http://www.uniprot.org/uniprot/P34355 P34355]
−
** [http://www.uniprot.org/uniprot/O66790 O66790]
+
** [http://www.uniprot.org/uniprot/P13711 P13711]
−
** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
+
** [http://www.uniprot.org/uniprot/O23977 O23977]
−
** [http://www.uniprot.org/uniprot/P47348 P47348]
+
** [http://www.uniprot.org/uniprot/O65201 O65201]
−
** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
+
** [http://www.uniprot.org/uniprot/O65202 O65202]
−
** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
+
−
** [http://www.uniprot.org/uniprot/O26804 O26804]
+
−
** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
+
−
** [http://www.uniprot.org/uniprot/P43788 P43788]
+
−
** [http://www.uniprot.org/uniprot/Q58931 Q58931]
+
−
** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
+
−
** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
+
−
** [http://www.uniprot.org/uniprot/P23160 P23160]
+
−
** [http://www.uniprot.org/uniprot/P39916 P39916]
+
−
** [http://www.uniprot.org/uniprot/Q39242 Q39242]
+
−
** [http://www.uniprot.org/uniprot/Q39243 Q39243]
+
−
** [http://www.uniprot.org/uniprot/P38816 P38816]
+
−
** [http://www.uniprot.org/uniprot/Q25861 Q25861]
+
−
** [http://www.uniprot.org/uniprot/P29509 P29509]
+
−
** [http://www.uniprot.org/uniprot/P52213 P52213]
+
−
** [http://www.uniprot.org/uniprot/Q16881 Q16881]
+
−
** [http://www.uniprot.org/uniprot/P75531 P75531]
+
−
** [http://www.uniprot.org/uniprot/P74746 P74746]
+
−
** [http://www.uniprot.org/uniprot/P46843 P46843]
+
−
** [http://www.uniprot.org/uniprot/O54535 O54535]
+
−
** [http://www.uniprot.org/uniprot/Q39951 Q39951]
+
−
** [http://www.uniprot.org/uniprot/Q92375 Q92375]
+
−
** [http://www.uniprot.org/uniprot/P52215 P52215]
+
−
** [http://www.uniprot.org/uniprot/P51978 P51978]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=nucleoredoxin}}
+
{{#set: common name=acyl-coenzyme_a_oxidase}}
−
{{#set: common name=ORF}}
+
{{#set: ec number=EC-1.3.3.6}}
−
{{#set: common name=thioredoxin_reductase_tr1}}
+
{{#set: gene associated=Tiso_gene_18566}}
−
{{#set: common name=thioredoxin_reductase}}
+
{{#set: in pathway=PWY-7007}}
−
{{#set: ec number=EC-1.8.1.9}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: gene associated=Tiso_gene_16927|Tiso_gene_475|Tiso_gene_15704|Tiso_gene_18783}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: in pathway=THIOREDOX-PWY}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 00:11, 19 March 2018

Reaction ACYL-COA-OXIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7007, methyl ketone biosynthesis (engineered): PWY-7007
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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