Difference between revisions of "Tiso gene 10406"

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(Created page with "Category:Gene == Gene Tiso_gene_12988 == * left end position: ** 3992 * transcription direction: ** POSITIVE * right end position: ** 6218 * centisome position: ** 60.5766...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-11417 RXN3DJ-11417] == * direction: ** LEFT-TO-RIGHT * common name: ** sphingosine_kinase_1...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_12988 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-11417 RXN3DJ-11417] ==
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* left end position:
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* direction:
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** 3992
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** sphingosine_kinase_1
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* right end position:
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* ec number:
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** 6218
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** [http://enzyme.expasy.org/EC/2.7.1.91 EC-2.7.1.91]
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* centisome position:
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** 60.57663   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[SPHINGOSINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CPD3DJ-11366]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 sphingosine[c] '''+''' 1 ATP[c] '''=>''' 1 sphingosine 1-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[TRNA-CHARGING-PWY]]
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* [[Tiso_gene_1163]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11470 PWY3DJ-11470]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3992}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01926 R01926]
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{{#set: right end position=6218}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=60.57663    }}
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{{#set: common name=sphingosine_kinase_1}}
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{{#set: reaction associated=TRYPTOPHAN--TRNA-LIGASE-RXN}}
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{{#set: ec number=EC-2.7.1.91}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: gene associated=Tiso_gene_1163}}
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{{#set: in pathway=PWY3DJ-11470}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 00:12, 19 March 2018

Reaction RXN3DJ-11417

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • sphingosine_kinase_1
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 sphingosine[c] + 1 ATP[c] => 1 sphingosine 1-phosphate[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY3DJ-11470, sphingosine and sphingosine-1-phosphate metabolism: PWY3DJ-11470
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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