Difference between revisions of "DIMP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE--TRNA-LIGASE-RXN METHIONINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PURINE-NUCLEOSIDASE-RXN PURINE-NUCLEOSIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE--TRNA-LIGASE-RXN METHIONINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PURINE-NUCLEOSIDASE-RXN PURINE-NUCLEOSIDASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** methionyl-trna_synthetase
+
** nucleoside_hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.10 EC-6.1.1.10]
+
** [http://enzyme.expasy.org/EC/3.2.2.1 EC-3.2.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[Elongation-tRNAMet]][c] '''=>''' 1 [[Charged-MET-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[Purine-Ribonucleosides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-Ribofuranose]][c] '''+''' 1 [[Purine-Bases]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 L-methionine[c] '''+''' 1 elongator tRNAmet[c] '''=>''' 1 an L-methionyl-[elongator tRNAmet][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
+
** 1 a purine ribonucleoside[c] '''+''' 1 H2O[c] '''=>''' 1 D-ribofuranose[c] '''+''' 1 a purine base[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_406]]
+
* [[Tiso_gene_12995]]
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_284]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
* [[Tiso_gene_11910]]
 +
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 
−
** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13481 13481]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03659 R03659]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02341 R02341]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P56127 P56127]
+
** [http://www.uniprot.org/uniprot/Q9CH97 Q9CH97]
−
** [http://www.uniprot.org/uniprot/Q44951 Q44951]
+
−
** [http://www.uniprot.org/uniprot/P47267 P47267]
+
−
** [http://www.uniprot.org/uniprot/O84035 O84035]
+
−
** [http://www.uniprot.org/uniprot/O28819 O28819]
+
−
** [http://www.uniprot.org/uniprot/O58721 O58721]
+
−
** [http://www.uniprot.org/uniprot/O83776 O83776]
+
−
** [http://www.uniprot.org/uniprot/O33925 O33925]
+
−
** [http://www.uniprot.org/uniprot/Q58659 Q58659]
+
−
** [http://www.uniprot.org/uniprot/O66738 O66738]
+
−
** [http://www.uniprot.org/uniprot/Q9ZCP0 Q9ZCP0]
+
−
** [http://www.uniprot.org/uniprot/Q9PP85 Q9PP85]
+
−
** [http://www.uniprot.org/uniprot/O26687 O26687]
+
−
** [http://www.uniprot.org/uniprot/O67298 O67298]
+
−
** [http://www.uniprot.org/uniprot/Q9JWP0 Q9JWP0]
+
−
** [http://www.uniprot.org/uniprot/Q9ZKG9 Q9ZKG9]
+
−
** [http://www.uniprot.org/uniprot/Q9Z959 Q9Z959]
+
−
** [http://www.uniprot.org/uniprot/Q9CHE0 Q9CHE0]
+
−
** [http://www.uniprot.org/uniprot/P43828 P43828]
+
−
** [http://www.uniprot.org/uniprot/P56192 P56192]
+
−
** [http://www.uniprot.org/uniprot/Q50319 Q50319]
+
−
** [http://www.uniprot.org/uniprot/P23920 P23920]
+
−
** [http://www.uniprot.org/uniprot/P75091 P75091]
+
−
** [http://www.uniprot.org/uniprot/Q55729 Q55729]
+
−
** [http://www.uniprot.org/uniprot/P22438 P22438]
+
−
** [http://www.uniprot.org/uniprot/P00958 P00958]
+
−
** [http://www.uniprot.org/uniprot/P00959 P00959]
+
−
** [http://www.uniprot.org/uniprot/Q9M2T9 Q9M2T9]
+
−
** [http://www.uniprot.org/uniprot/O23761 O23761]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=methionyl-trna_synthetase}}
+
{{#set: common name=nucleoside_hydrolase}}
−
{{#set: ec number=EC-6.1.1.10}}
+
{{#set: ec number=EC-3.2.2.1}}
−
{{#set: gene associated=Tiso_gene_406|Tiso_gene_284}}
+
{{#set: gene associated=Tiso_gene_12995|Tiso_gene_11910}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 00:12, 19 March 2018

Reaction PURINE-NUCLEOSIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nucleoside_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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