Difference between revisions of "BENZENE-NO2"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-uridine-38-40 tRNA-uridine-38-40] == * common name: ** a uridine38-40 in tRNA * Synonym(s)...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9536 RXN-9536] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-meristoyl-[acyl-carrier...") |
||
Line 1: | Line 1: | ||
− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9536 RXN-9536] == |
+ | * direction: | ||
+ | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** 3-oxo-meristoyl-[acyl-carrier protein] reductase |
+ | ** polyketide_synthase | ||
+ | ** 3-oxoacyl-(acyl-carrier-protein) | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86] | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85] | ||
+ | ** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100] | ||
* Synonym(s): | * Synonym(s): | ||
− | |||
− | == Reaction(s) | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | == | + | ** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-oxo-myristoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxymyristoyl-ACPs]][c] |
− | == | + | * With common name(s): |
+ | ** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a 3-oxo-myristoyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxymyristoyl-[acp][c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_13394]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_10415]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | * [[Tiso_gene_13083]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_10876]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_500]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_624]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | * [[Tiso_gene_16579]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | * [[Tiso_gene_136]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_9885]] | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_135]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | == Pathways == | ||
+ | * [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971] | ||
+ | ** '''31''' reactions found over '''31''' reactions in the full pathway | ||
+ | * [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] | ||
+ | ** '''31''' reactions found over '''31''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[manual]] | ||
+ | ** Source: [[manual-primary_network]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: common name= | + | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: common name= | + | {{#set: common name=3-oxo-meristoyl-[acyl-carrier protein] reductase}} |
− | {{#set: | + | {{#set: common name=polyketide_synthase}} |
+ | {{#set: common name=3-oxoacyl-(acyl-carrier-protein)}} | ||
+ | {{#set: ec number=EC-2.3.1.86}} | ||
+ | {{#set: ec number=EC-2.3.1.85}} | ||
+ | {{#set: ec number=EC-1.1.1.100}} | ||
+ | {{#set: gene associated=Tiso_gene_13394|Tiso_gene_10415|Tiso_gene_13083|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_624|Tiso_gene_16579|Tiso_gene_136|Tiso_gene_9885|Tiso_gene_135}} | ||
+ | {{#set: in pathway=PWY-5971|PWY-5994}} | ||
+ | {{#set: reconstruction category=orthology|manual|annotation}} | ||
+ | {{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 00:12, 19 March 2018
Contents
Reaction RXN-9536
- direction:
- LEFT-TO-RIGHT
- common name:
- 3-oxo-meristoyl-[acyl-carrier protein] reductase
- polyketide_synthase
- 3-oxoacyl-(acyl-carrier-protein)
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 NADPH[c] + 1 PROTON[c] + 1 3-oxo-myristoyl-ACPs[c] => 1 NADP[c] + 1 R-3-hydroxymyristoyl-ACPs[c]
- With common name(s):
- 1 NADPH[c] + 1 H+[c] + 1 a 3-oxo-myristoyl-[acp][c] => 1 NADP+[c] + 1 a (3R)-3-hydroxymyristoyl-[acp][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_13394
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_10415
- Tiso_gene_13083
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-synechocystis
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
- Tiso_gene_10876
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_500
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_624
- Tiso_gene_16579
- Tiso_gene_136
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_9885
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- Tiso_gene_135
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
- 31 reactions found over 31 reactions in the full pathway
- PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
- 31 reactions found over 31 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-synechocystis
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
"3-oxo-meristoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.