Difference between revisions of "IDS2"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-3542 RXN0-3542] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/3.6...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEAMINASE-RXN AMP-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** amp_deamina...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEAMINASE-RXN AMP-DEAMINASE-RXN] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
| + | * common name: | ||
| + | ** amp_deaminase | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/3. | + | ** [http://enzyme.expasy.org/EC/3.5.4.17 EC-3.5.4.17] |
| + | ** [http://enzyme.expasy.org/EC/3.5.4.6 EC-3.5.4.6] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[IMP]][c] '''+''' 1 [[AMMONIUM]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 H2O[c] '''=>''' 1 IMP[c] '''+''' 1 ammonium[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[Tiso_gene_1778]] |
| − | ** | + | ** IN-SILICO_ANNOTATION |
| + | ***EC-NUMBER | ||
** [[pantograph]]-[[esiliculosus]] | ** [[pantograph]]-[[esiliculosus]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596] | ||
| + | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-esiliculosus]] |
| − | ** | + | *** Tool: [[pantograph]] |
| − | *** [[ | + | * Category: [[annotation]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14777 14777] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00181 R00181] |
| − | {{#set: direction= | + | * UNIPROT: |
| − | {{#set: ec number=EC-3. | + | ** [http://www.uniprot.org/uniprot/P10759 P10759] |
| − | {{#set: gene associated= | + | ** [http://www.uniprot.org/uniprot/Q02356 Q02356] |
| − | {{#set: in pathway=}} | + | ** [http://www.uniprot.org/uniprot/P23109 P23109] |
| − | {{#set: reconstruction category=orthology}} | + | ** [http://www.uniprot.org/uniprot/P15274 P15274] |
| − | {{#set: reconstruction | + | ** [http://www.uniprot.org/uniprot/Q7M3H8 Q7M3H8] |
| − | {{#set: reconstruction | + | ** [http://www.uniprot.org/uniprot/Q01433 Q01433] |
| + | ** [http://www.uniprot.org/uniprot/Q01432 Q01432] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=amp_deaminase}} | ||
| + | {{#set: ec number=EC-3.5.4.17}} | ||
| + | {{#set: ec number=EC-3.5.4.6}} | ||
| + | {{#set: gene associated=Tiso_gene_1778}} | ||
| + | {{#set: in pathway=PWY-6596}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 00:12, 19 March 2018
Contents
Reaction AMP-DEAMINASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- amp_deaminase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 H+[c] + 1 AMP[c] + 1 H2O[c] => 1 IMP[c] + 1 ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_1778
- IN-SILICO_ANNOTATION
- EC-NUMBER
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
Pathways
- PWY-6596, adenosine nucleotides degradation I: PWY-6596
- 8 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
